RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 DYNC1LI2O43237 492 aaPredicted RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 EIF3JO75822 258 aaKnown RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 CABYRO75952 493 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 SEC24BO95487 1268 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TXNP10599 105 aaKnown RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 MAGEA10P43363 369 aaPredicted RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 CPT1AP50416 773 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 ANAPC15P60006 121 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 PURAQ00577 322 aaKnown RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TLE2Q04725 743 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 ARHGAP1Q07960 439 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 APOBRQ0VD83 1088 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TTLL4Q14679 1199 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 ARHGEF16Q5VV41 709 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 WWC2Q6AWC2 1192 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 PPP1R18Q6NYC8 613 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 FAM126BQ8IXS8 530 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 PIBF1Q8WXW3 757 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 AP5M1Q9H0R1 490 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TBX21Q9UL17 535 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 MROH7Q68CQ1 1323 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 SIP14410 1827 aa9.95□□□□□ -0.82
ATG4D-202ENST00000585437 TRIP12Q14669 1992 aaPredicted RBP9.95□□□□□ -0.82
ATG4D-202ENST00000585437 PTPRSQ13332 1948 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 hCG_1642624A0A1W2PR95 340 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 TRIM43BA6NCK2 446 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 ARVCFO00192 962 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 KIAA0355O15063 1070 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 STAM2O75886 525 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 CD4P01730 458 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 CLTBP09497 229 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 HOXD8P13378 290 aaPredicted RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 MRPS9P82933 396 aaKnown RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 FAAP100Q0VG06 881 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 NTRK3Q16288 839 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 USP17L6PQ6QN14 398 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 CXCL17Q6UXB2 119 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 NOL8Q76FK4 1167 aaKnown RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 SH3RF1Q7Z6J0 888 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 CCDC82Q8N4S0 544 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 OR6J1Q8NGC5 347 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 COPS5Q92905 334 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 TRIM43Q96BQ3 446 aaPredicted RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 POLR3EQ9NVU0 708 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
ATG4D-202ENST00000585437 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
ATG4D-202ENST00000585437 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 STXBP3O00186 592 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 ZEB2O60315 1214 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 GH1P01241 217 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 ITGB8P26012 769 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 PDIA3P30101 505 aaKnown RBP9.93□□□□□ -0.82
ATG4D-202ENST00000585437 CCND2P30279 289 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 ICAM3P32942 547 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
ATG4D-202ENST00000585437 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATG4D-202ENST00000585437 LY6KQ17RY6 165 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 PCNX4Q63HM2 1172 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 KCNV1Q6PIU1 500 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 SEPT14Q6ZU15 432 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 HEATR3Q7Z4Q2 680 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 UPF3BQ9BZI7 483 aaKnown RBP9.93□□□□□ -0.82
ATG4D-202ENST00000585437 BARHL2Q9NY43 387 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
ATG4D-202ENST00000585437 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 DCDC2CA8MYV0 355 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 KPNA6O60684 536 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 PQBP1O60828 265 aaKnown RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 MMP3P08254 477 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 TGFB3P10600 412 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 MYCLP12524 364 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 IFNAR1P17181 557 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 UBA1P22314 1058 aaKnown RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 CLK2P49760 499 aaKnown RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 FGD1P98174 961 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 SEMA3FQ13275 785 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 PKN1Q16512 942 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 PFKFB3Q16875 520 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 SMARCC2Q8TAQ2 1214 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 CUL5Q93034 780 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 RNF26Q9BY78 433 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 ALDH8A1Q9H2A2 487 aaPredicted RBP9.92□□□□□ -0.82
ATG4D-202ENST00000585437 PSTPIP2Q9H939 334 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 RIC8AQ9NPQ8 531 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 MRVI1Q9Y6F6 885 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 KAT6AQ92794 2004 aa9.92□□□□□ -0.82
ATG4D-202ENST00000585437 SPATA31C2B4DYI2 1134 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms