RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 GH1P01241 217 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 MMP3P08254 477 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 CCL23P55773 120 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 NBPF20Q3BBV1 942 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 RNF20Q5VTR2 975 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 GPR153Q6NV75 609 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 RRP36Q96EU6 259 aaKnown RBP20.84■□□□□ 0.93
SRSF1-208ENST00000584773 HIPK3Q9H422 1215 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 DDX41Q9UJV9 622 aaKnown RBP20.84■□□□□ 0.93
SRSF1-208ENST00000584773 SLC12A7Q9Y666 1083 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 COL6A3P12111 3177 aa20.84■□□□□ 0.93
SRSF1-208ENST00000584773 RBAK-RBAKDNI3L0D1 243 aa20.83■□□□□ 0.93
SRSF1-208ENST00000584773 CYP2C9P11712 490 aa20.83■□□□□ 0.93
SRSF1-208ENST00000584773 CPA1P15085 419 aa20.83■□□□□ 0.93
SRSF1-208ENST00000584773 FAM47CQ5HY64 1035 aa20.83■□□□□ 0.93
SRSF1-208ENST00000584773 TMTC2Q8N394 836 aa20.83■□□□□ 0.93
SRSF1-208ENST00000584773 NOC4LQ9BVI4 516 aaKnown RBP20.83■□□□□ 0.93
SRSF1-208ENST00000584773 EXOSC10Q01780 885 aaKnown RBP20.82■□□□□ 0.92
SRSF1-208ENST00000584773 BRDTQ58F21 947 aaPredicted RBP20.82■□□□□ 0.92
SRSF1-208ENST00000584773 USP17L6PQ6QN14 398 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 TMTC3Q6ZXV5 915 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 VSIG10LQ86VR7 867 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 SGMS1Q86VZ5 419 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 MAP3K20Q9NYL2 800 aaKnown RBP20.82■□□□□ 0.92
SRSF1-208ENST00000584773 BRPF3Q9ULD4 1205 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 DOCK5Q9H7D0 1870 aa20.82■□□□□ 0.92
SRSF1-208ENST00000584773 PPIGQ13427 754 aaKnown RBP eCLIP20.81■□□□□ 0.925e-26■■□□□ 13.2
SRSF1-208ENST00000584773 TMEM240Q5SV17 173 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 FAM109BQ6ICB4 259 aaPredicted RBP20.81■□□□□ 0.92
SRSF1-208ENST00000584773 APOA5Q6Q788 366 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 TMEM199Q8N511 208 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 FANCBQ8NB91 859 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 SCLYQ96I15 445 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
SRSF1-208ENST00000584773 SCN5AQ14524 2016 aa20.81■□□□□ 0.92
SRSF1-208ENST00000584773 CALM1P0DP23 149 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 CALM2P0DP24 149 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 CALM3P0DP25 149 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 CCND2P30279 289 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 GNAQP50148 359 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 SP2Q02086 613 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 TRAF1Q13077 416 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 DHX32Q7L7V1 743 aaKnown RBP20.8■□□□□ 0.92
SRSF1-208ENST00000584773 SAMD3Q8N6K7 520 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 KAT2BQ92831 832 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 LZTS2Q9BRK4 669 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 BCAS3Q9H6U6 928 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 FRMPD4Q14CM0 1322 aa20.8■□□□□ 0.92
SRSF1-208ENST00000584773 MEIS2O14770 477 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 ZNF286BP0CG31 522 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 SMARCA1P28370 1054 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 MRPS9P82933 396 aaKnown RBP20.79■□□□□ 0.92
SRSF1-208ENST00000584773 TSGA10IPQ3SY00 556 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
SRSF1-208ENST00000584773 KPNA6O60684 536 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 GGPS1O95749 300 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 NEFLP07196 543 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 UBA1P22314 1058 aaKnown RBP20.78■□□□□ 0.92
SRSF1-208ENST00000584773 UBE2SQ16763 222 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
SRSF1-208ENST00000584773 SMARCC2Q8TAQ2 1214 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 GUCD1Q96NT3 240 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 SEZ6LQ9BYH1 1024 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 GRXCR1A8MXD5 290 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 SMAD3P84022 425 aaKnown RBP20.78■□□□□ 0.92
SRSF1-208ENST00000584773 SEMA3FQ13275 785 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 HSDL1Q3SXM5 330 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 NFRKBQ6P4R8 1299 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
SRSF1-208ENST00000584773 IL23AQ9NPF7 189 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 TELO2Q9Y4R8 837 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 SNX14Q9Y5W7 946 aa20.78■□□□□ 0.92
SRSF1-208ENST00000584773 TRIP12Q14669 1992 aaPredicted RBP20.77■□□□□ 0.92
SRSF1-208ENST00000584773 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 CASTP20810 708 aaKnown RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 HSPA4P34932 840 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 LAMC2Q13753 1193 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 CELF3Q5SZQ8 465 aaKnown RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 ZNF697Q5TEC3 545 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 MYSM1Q5VVJ2 828 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 GDF6Q6KF10 455 aaPredicted RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 SYNE3Q6ZMZ3 975 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 HEATR3Q7Z4Q2 680 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 PPTC7Q8NI37 304 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 KCNB2Q92953 911 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 SPATA33Q96N06 139 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 CTAGE1Q96RT6 745 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 ALG1Q9BT22 464 aa20.77■□□□□ 0.91
SRSF1-208ENST00000584773 TTYH1Q9H313 450 aaPredicted RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 CXXC1Q9P0U4 656 aaPredicted RBP20.77■□□□□ 0.91
SRSF1-208ENST00000584773 ZBTB43O43298 467 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 CDC27P30260 824 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms