RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PPP1R13LQ8WUF5 828 aa24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 ALDH8A1Q9H2A2 487 aaPredicted RBP24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 SEC63Q9UGP8 760 aaKnown RBP24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 MRVI1Q9Y6F6 885 aa24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 BAZ2BQ9UIF8 2168 aaKnown RBP24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 KPNA6O60684 536 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 RGS20O76081 388 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 DHX32Q7L7V1 743 aaKnown RBP24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 MICU3Q86XE3 530 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 CCDC82Q8N4S0 544 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 DEFB123Q8N688 67 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 FANCBQ8NB91 859 aa24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 ZFP91Q96JP5 570 aaPredicted RBP24.79■■□□□ 1.56
PPP4R1-228ENST00000584074 hCG_1642624A0A1W2PR95 340 aa24.78■■□□□ 1.56
PPP4R1-228ENST00000584074 CSF2RAP15509 400 aa24.78■■□□□ 1.56
PPP4R1-228ENST00000584074 NBPF20Q3BBV1 942 aa24.78■■□□□ 1.56
PPP4R1-228ENST00000584074 RNPC3Q96LT9 517 aaKnown RBP24.78■■□□□ 1.56
PPP4R1-228ENST00000584074 HIPK3Q9H422 1215 aa24.78■■□□□ 1.56
PPP4R1-228ENST00000584074 MMP3P08254 477 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 CCND2P30279 289 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 KRT32Q14532 448 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 APOA5Q6Q788 366 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 SYNE3Q6ZMZ3 975 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 TMTC3Q6ZXV5 915 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 C16orf59Q7L2K0 433 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 TRMT13Q9NUP7 481 aaKnown RBP24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 BRPF3Q9ULD4 1205 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 UMODL1Q5DID0 1318 aa24.77■■□□□ 1.56
PPP4R1-228ENST00000584074 CHMP4BP1P59074 171 aa24.76■■□□□ 1.55
PPP4R1-228ENST00000584074 FAM47CQ5HY64 1035 aa24.76■■□□□ 1.55
PPP4R1-228ENST00000584074 USP17L6PQ6QN14 398 aa24.76■■□□□ 1.55
PPP4R1-228ENST00000584074 TMEM199Q8N511 208 aa24.76■■□□□ 1.55
PPP4R1-228ENST00000584074 NOC4LQ9BVI4 516 aaKnown RBP24.76■■□□□ 1.55
PPP4R1-228ENST00000584074 PPIGQ13427 754 aaKnown RBP eCLIP24.75■■□□□ 1.552e-10■■□□□ 12.5
PPP4R1-228ENST00000584074 KCNB2Q92953 911 aa24.75■■□□□ 1.55
PPP4R1-228ENST00000584074 EMID1Q96A84 441 aaPredicted RBP24.75■■□□□ 1.55
PPP4R1-228ENST00000584074 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.75■■□□□ 1.552e-13■■■■□ 22.1
PPP4R1-228ENST00000584074 MEIS2O14770 477 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 SORBS3O60504 671 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 ACRP10323 421 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 CYP2C9P11712 490 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 CPA1P15085 419 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 LAMC2Q13753 1193 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 NFRKBQ6P4R8 1299 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 DHX37Q8IY37 1157 aaKnown RBP24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 SMARCC2Q8TAQ2 1214 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 GPKOWQ92917 476 aaPredicted RBP eCLIP24.74■■□□□ 1.554e-7■■□□□ 11.4
PPP4R1-228ENST00000584074 FRMPD4Q14CM0 1322 aa24.74■■□□□ 1.55
PPP4R1-228ENST00000584074 ZBTB43O43298 467 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 HMGB1P09429 215 aaKnown RBP24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 HSPA4P34932 840 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 CCL23P55773 120 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 MRPS9P82933 396 aaKnown RBP24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 SP2Q02086 613 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 KCNV1Q6PIU1 500 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 KAT2BQ92831 832 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 CUL5Q93034 780 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 WNT8AQ9H1J5 351 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 MTMR10Q9NXD2 777 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 SNX14Q9Y5W7 946 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 KIAA1217Q5T5P2 1943 aa24.73■■□□□ 1.55
PPP4R1-228ENST00000584074 COL6A3P12111 3177 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 PIK3CDO00329 1044 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 SUPT20HL2P0C7V6 817 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 CASTP20810 708 aaKnown RBP24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 DGKDQ16760 1214 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 TMEM240Q5SV17 173 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 CELF3Q5SZQ8 465 aaKnown RBP24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 MYSM1Q5VVJ2 828 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 PPTC7Q8NI37 304 aa24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 JAKMIP1Q96N16 626 aaKnown RBP24.72■■□□□ 1.55
PPP4R1-228ENST00000584074 KLF18A0A0U1RQI7 1052 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 GGPS1O95749 300 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 TGFB3P10600 412 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 UBA1P22314 1058 aaKnown RBP24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 SMAD3P84022 425 aaKnown RBP24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 RTN1Q16799 776 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 FAM109BQ6ICB4 259 aaPredicted RBP24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 ZNF365Q70YC5 407 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 HEATR3Q7Z4Q2 680 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 PSTPIP2Q9H939 334 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 IL23AQ9NPF7 189 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 RBM28Q9NW13 759 aaKnown RBP24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 RTEL1Q9NZ71 1219 aa24.71■■□□□ 1.55
PPP4R1-228ENST00000584074 CNTNAP5Q8WYK1 1306 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 REC8O95072 547 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 FGD1P98174 961 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 PTPN11Q06124 597 aaPredicted RBP24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 FUT2Q10981 343 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 SPATA33Q96N06 139 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 BCAS3Q9H6U6 928 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 SCN10AQ9Y5Y9 1956 aa24.7■■□□□ 1.54
PPP4R1-228ENST00000584074 GOLGA8AA7E2F4 631 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 GOLGA8BA8MQT2 603 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 ZNF286BP0CG31 522 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 HSDL1Q3SXM5 330 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 GNPTABQ3T906 1256 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 PSRC1Q6PGN9 363 aaPredicted RBP24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 SCLYQ96I15 445 aa24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 FAM161BQ96MY7 647 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms