RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
SKA2-209ENST00000583976 DHX38Q92620 1227 aaKnown RBP18.23■□□□□ 0.51
SKA2-209ENST00000583976 KAT2BQ92831 832 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
SKA2-209ENST00000583976 SORBS3O60504 671 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
SKA2-209ENST00000583976 ZNF286BP0CG31 522 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 KRT40Q6A162 431 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
SKA2-209ENST00000583976 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 ADAMTS19Q8TE59 1207 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
SKA2-209ENST00000583976 ASB2Q96Q27 587 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 RMDN3Q96TC7 470 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 CTNNA3Q9UI47 895 aa18.22■□□□□ 0.51
SKA2-209ENST00000583976 TNFRSF10AO00220 468 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 KPNA6O60684 536 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 GH1P01241 217 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 PARP1P09874 1014 aaKnown RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 TFF2Q03403 129 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 PTGISQ16647 500 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 IMMTQ16891 758 aaKnown RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 NSUN6Q8TEA1 469 aaKnown RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 ATXN2LQ8WWM7 1075 aaKnown RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
SKA2-209ENST00000583976 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.51
SKA2-209ENST00000583976 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
SKA2-209ENST00000583976 TCF20Q9UGU0 1960 aaKnown RBP18.21■□□□□ 0.5
SKA2-209ENST00000583976 RFC2P35250 354 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 PTPN11Q06124 597 aaPredicted RBP18.2■□□□□ 0.5
SKA2-209ENST00000583976 GPNMBQ14956 572 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 RETREG2Q8NC44 543 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 IL31RAQ8NI17 732 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 WNT8BQ93098 351 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 UBAC1Q9BSL1 405 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 PXMP2Q9NR77 195 aa18.2■□□□□ 0.5
SKA2-209ENST00000583976 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
SKA2-209ENST00000583976 LCHNA4D1U4 455 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 CFBP00751 764 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 ACTN1P12814 892 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 TAP1Q03518 808 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 BFSP2Q13515 415 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 SEC23AQ15436 765 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 ARNTL2Q8WYA1 636 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
SKA2-209ENST00000583976 B4DLN1 442 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 HSD17B4P51659 736 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 DEFB103AP81534 67 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 STXBP2Q15833 593 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 CCDC178Q5BJE1 867 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 SESTD1Q86VW0 696 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 UHRF1Q96T88 793 aaPredicted RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 SENP2Q9HC62 589 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 HDAC6Q9UBN7 1215 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
SKA2-209ENST00000583976 MTCH2Q9Y6C9 303 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 NCOR1O75376 2440 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 BDP1A6H8Y1 2624 aa18.18■□□□□ 0.5
SKA2-209ENST00000583976 RGS20O76081 388 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 F2P00734 622 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 NR3C2P08235 984 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 CYP21A2P08686 494 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 PSEN2P49810 448 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 KCNQ1P51787 676 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 HIC1Q14526 733 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 SKIV2LQ15477 1246 aaKnown RBP18.17■□□□□ 0.5
SKA2-209ENST00000583976 HOMER1Q86YM7 354 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 AFAP1L1Q8TED9 768 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 IWS1Q96ST2 819 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 KRT23Q9C075 422 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 GTF2IRD1Q9UHL9 959 aa18.17■□□□□ 0.5
SKA2-209ENST00000583976 RAPGEFL1Q9UHV5 662 aa18.17■□□□□ 0.5
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