RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ERCC3P19447 782 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 CMA1P23946 247 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ZNF76P36508 570 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 TXLNAP40222 546 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 SNAP25P60880 206 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 PTGDRQ13258 359 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 KLHL40Q2TBA0 621 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 LETM2Q2VYF4 491 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 NOM1Q5C9Z4 860 aaKnown RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 IER5LQ5T953 404 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 DTHD1Q6ZMT9 781 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 CAPNS2Q96L46 248 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 RMDN3Q96TC7 470 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 PTPN18Q99952 460 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 FAM13BQ9NYF5 915 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 DDX25Q9UHL0 483 aaKnown RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 PCDHB6Q9Y5E3 794 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 CLIC4Q9Y696 253 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ADGRA2Q96PE1 1338 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 FAM237AA0A1B0GTK4 181 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 SLC15A5A6NIM6 579 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 LETM1O95202 739 aaPredicted RBP10.43□□□□□ -0.74
CASC3-209ENST00000583902 TGFB3P10600 412 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 CCND2P30279 289 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 MCM7P33993 719 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 BAATQ14032 418 aaPredicted RBP10.43□□□□□ -0.74
CASC3-209ENST00000583902 ARHGEF6Q15052 776 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 ZNF174Q15697 407 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 CALCRLQ16602 461 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 UBE2SQ16763 222 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 CEP55Q53EZ4 464 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 MUM1L1Q5H9M0 696 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 EARS2Q5JPH6 523 aaKnown RBP10.43□□□□□ -0.74
CASC3-209ENST00000583902 NSMFQ6X4W1 530 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 NLRX1Q86UT6 975 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 VSIG10LQ86VR7 867 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 FCHSD1Q86WN1 690 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 RASGRP4Q8TDF6 673 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 GPRASP2Q96D09 838 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 MMP19Q99542 508 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 PAGR1Q9BTK6 254 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
CASC3-209ENST00000583902 TMEM260Q9NX78 707 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CASC3-209ENST00000583902 PCDHA7Q9UN72 937 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 RIPK3Q9Y572 518 aa10.43□□□□□ -0.74
CASC3-209ENST00000583902 DNAJC25-GNG10A0A024R161 153 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 IGF2BP3O00425 579 aaKnown RBP eCLIP10.42□□□□□ -0.74
CASC3-209ENST00000583902 MEIS1O00470 390 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 MARCH6O60337 910 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 DTNBO60941 627 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 EIF3JO75822 258 aaKnown RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 GNRH1P01148 92 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 CYP2C8P10632 490 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 MUTP22033 750 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 PGM5Q15124 567 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 STXBP2Q15833 593 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 C17orf99Q6UX52 265 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 CCDC73Q6ZRK6 1079 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 ANKRD13CQ8N6S4 541 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 C4orf32Q8N8J7 132 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 GIMAP8Q8ND71 665 aaPredicted RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 MORC4Q8TE76 937 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 SOCS4Q8WXH5 440 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 MRPS27Q92552 414 aaKnown RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 TIGD1Q96MW7 591 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 MTMR9Q96QG7 549 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 RIT2Q99578 217 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 MXRA8Q9BRK3 442 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 PDCD2LQ9BRP1 358 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 TXNRD2Q9NNW7 524 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 KCNMB3Q9NPA1 279 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 JADE2Q9NQC1 790 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 PXMP2Q9NR77 195 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 TBC1D22BQ9NU19 505 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 DDX19AQ9NUU7 478 aaKnown RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 SAGE1Q9NXZ1 904 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 HOOK1Q9UJC3 728 aaKnown RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
CASC3-209ENST00000583902 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
CASC3-209ENST00000583902 THSD7BQ9C0I4 1608 aa10.41□□□□□ -0.74
CASC3-209ENST00000583902 CTAGE5O15320 804 aa10.41□□□□□ -0.74
CASC3-209ENST00000583902 NR3C2P08235 984 aa10.41□□□□□ -0.74
CASC3-209ENST00000583902 ATP2B1P20020 1258 aa10.41□□□□□ -0.74
CASC3-209ENST00000583902 CEBPZQ03701 1054 aaKnown RBP10.41□□□□□ -0.74
CASC3-209ENST00000583902 FAM160A1Q05DH4 1040 aa10.41□□□□□ -0.74
CASC3-209ENST00000583902 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms