RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ZNFX1Q9P2E3 1918 aaKnown RBP12.47□□□□□ -0.41
TOP3A-216ENST00000583804 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 RBBP6Q7Z6E9 1792 aaKnown RBP12.47□□□□□ -0.41
TOP3A-216ENST00000583804 CASP8AP2Q9UKL3 1982 aa12.47□□□□□ -0.41
TOP3A-216ENST00000583804 ELNP15502 786 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 CCND2P30279 289 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 CYP2C19P33261 490 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 ARMCX2Q7L311 632 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
TOP3A-216ENST00000583804 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
TOP3A-216ENST00000583804 RTEL1Q9NZ71 1219 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 PTCH2Q9Y6C5 1203 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 MYH15Q9Y2K3 1946 aa12.46□□□□□ -0.41
TOP3A-216ENST00000583804 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.42
TOP3A-216ENST00000583804 GSE1Q14687 1217 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.42
TOP3A-216ENST00000583804 LETM2Q2VYF4 491 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 PRAMEF19Q5SWL8 479 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 PCNX4Q63HM2 1172 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 XRRA1Q6P2D8 792 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.42
TOP3A-216ENST00000583804 TRIB2Q92519 343 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 GBP4Q96PP9 640 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.42
TOP3A-216ENST00000583804 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
TOP3A-216ENST00000583804 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.42
TOP3A-216ENST00000583804 ZNF236Q9UL36 1845 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 FRMPD4Q14CM0 1322 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 WNT7AO00755 349 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 SNAI1O95863 264 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-216ENST00000583804 EDNRBP24530 442 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 USP11P51784 963 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
TOP3A-216ENST00000583804 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-216ENST00000583804 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
TOP3A-216ENST00000583804 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-216ENST00000583804 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 CCNT1O60563 726 aaKnown RBP12.44□□□□□ -0.42
TOP3A-216ENST00000583804 CYP3A4P08684 503 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 GRK4P32298 578 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 TRIM32Q13049 653 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-216ENST00000583804 CYP2W1Q8TAV3 490 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 MORC4Q8TE76 937 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 ABHD16BQ9H3Z7 469 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 CLIC4Q9Y696 253 aa12.44□□□□□ -0.42
TOP3A-216ENST00000583804 PLXNA1Q9UIW2 1896 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 EDIL3O43854 480 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 STAM2O75886 525 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 TDP2O95551 362 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 HMGCRP04035 888 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 ITGB5P18084 799 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 MCM4P33991 863 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 KRT85P78386 507 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 ZNF174Q15697 407 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 CEP55Q53EZ4 464 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 PRR16Q569H4 304 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 RILPL1Q5EBL4 403 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 NLRX1Q86UT6 975 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 MXRA8Q9BRK3 442 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 WDR11Q9BZH6 1224 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 UBIAD1Q9Y5Z9 338 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 LCTP09848 1927 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 TCHHQ07283 1943 aa12.43□□□□□ -0.42
TOP3A-216ENST00000583804 FAM86B1E9PN63 330 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 FAM86B2P0C5J1 330 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 CNGA1P29973 690 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 CIITAP33076 1130 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 MCM7P33993 719 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 CACNB2Q08289 660 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 MTMR1Q13613 665 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
TOP3A-216ENST00000583804 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-216ENST00000583804 PLA2G4DQ86XP0 818 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms