RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 GIPC1O14908 333 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 RNF113AO15541 343 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 CAMTA2O94983 1202 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 ECEL1O95672 775 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 IFIT1P09914 478 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 CASTP20810 708 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 RPS6KB1P23443 525 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 ITPKAP23677 461 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 MAP4P27816 1152 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 CRKLP46109 303 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 MRPL58Q14197 206 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 CCDC158Q5M9N0 1113 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 JAKMIP1Q96N16 626 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 PUS3Q9BZE2 481 aaKnown RBP7.26□□□□□ -1.25
PRKCA-205ENST00000583775 PDRG1Q9NUG6 133 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 LMBRD1Q9NUN5 540 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 UBN2Q6ZU65 1347 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 MROH5Q6ZUA9 1318 aa7.26□□□□□ -1.25
PRKCA-205ENST00000583775 SART1O43290 800 aaKnown RBP7.25□□□□□ -1.25
PRKCA-205ENST00000583775 PAGE1O75459 146 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 PDE8BO95263 885 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 CELA3AP09093 270 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 UQCRFS1P1P0C7P4 283 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 FGFR2P21802 821 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 KCNJ4P48050 445 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 ITPK1Q13572 414 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 ATP2B3Q16720 1220 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 LDLRAD1Q5T700 205 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 BLOC1S2Q6QNY1 142 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 LDHAL6AQ6ZMR3 332 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 ZNF589Q86UQ0 364 aaPredicted RBP7.25□□□□□ -1.25
PRKCA-205ENST00000583775 STK35Q8TDR2 534 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 CHMP4CQ96CF2 233 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 ASIC4Q96FT7 647 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 NEUROD6Q96NK8 337 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 UTP14AQ9BVJ6 771 aaKnown RBP7.25□□□□□ -1.25
PRKCA-205ENST00000583775 AGXT2Q9BYV1 514 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 GREM2Q9H772 168 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 TRMT112Q9UI30 125 aaKnown RBP7.25□□□□□ -1.25
PRKCA-205ENST00000583775 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
PRKCA-205ENST00000583775 MYO5AQ9Y4I1 1855 aaKnown RBP7.25□□□□□ -1.25
PRKCA-205ENST00000583775 GOLIM4O00461 696 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 TIAF1O95411 115 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 NTSR2O95665 410 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 MBD3O95983 291 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
PRKCA-205ENST00000583775 ARL4DP49703 201 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 EVCP57679 992 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 ZNF445P59923 1031 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 C19orf57Q0VDD7 668 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 PKP1Q13835 747 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 TTF1Q15361 905 aaPredicted RBP7.24□□□□□ -1.25
PRKCA-205ENST00000583775 TAF1CQ15572 869 aaPredicted RBP7.24□□□□□ -1.25
PRKCA-205ENST00000583775 SGO2Q562F6 1265 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 TAF7LQ5H9L4 462 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 SLC10A5Q5PT55 438 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 ZSCAN25Q6NSZ9 544 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 SYTL4Q96C24 671 aaPredicted RBP7.24□□□□□ -1.25
PRKCA-205ENST00000583775 EDC3Q96F86 508 aaKnown RBP7.24□□□□□ -1.25
PRKCA-205ENST00000583775 FBXL18Q96ME1 805 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 CTNNA3Q9UI47 895 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 LEMD3Q9Y2U8 911 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 ATP6V1DQ9Y5K8 247 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 WDR19Q8NEZ3 1342 aa7.24□□□□□ -1.25
PRKCA-205ENST00000583775 GOLGA6L3A6NEY3 463 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 IGSF3O75054 1194 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 CTSBP07858 339 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 CYP21A2P08686 494 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 ZSCAN22P10073 491 aaPredicted RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 PDCP20941 246 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 GPTP24298 496 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 MRE11P49959 708 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 TOB2Q14106 344 aaPredicted RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 UBE3CQ15386 1083 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 SF3B3Q15393 1217 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 PUM3Q15397 648 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 CCDC85BQ15834 202 aaPredicted RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 METTL24Q5JXM2 366 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 GORABQ5T7V8 394 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 SUSD4Q5VX71 490 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 DDX46Q7L014 1031 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 VSIG10LQ86VR7 867 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 GRIN3AQ8TCU5 1115 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 LPIN2Q92539 896 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 APPBP2Q92624 585 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 NEK1Q96PY6 1258 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 LLPHQ9BRT6 129 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.23□□□□□ -1.258e-7■■■■■ 37.5
PRKCA-205ENST00000583775 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 CBX8Q9HC52 389 aa7.23□□□□□ -1.25
PRKCA-205ENST00000583775 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
PRKCA-205ENST00000583775 SMC3Q9UQE7 1217 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms