RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-229	ENST00000583697	LY6K	Q17RY6	165 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	TJAP1	Q5JTD0	557 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	IL27	Q8NEV9	243 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CAGE1	Q8TC20	777 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PPP1R13L	Q8WUF5	828 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	TBC1D5	Q92609	795 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	IL25	Q9H293	177 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	YBX2	Q9Y2T7	364 aa	Known RBP	10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PCDHA11	Q9Y5I1	949 aa		10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697		U3KPZ7	1027 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	IFIT3	O14879	490 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	BAIAP3	O94812	1187 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	IQCF3	P0C7M6	154 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MYCL	P12524	364 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	KCNJ6	P48051	423 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	WTAP	Q15007	396 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	SEC23A	Q15436	765 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PTGIS	Q16647	500 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CCDC62	Q6P9F0	684 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CYB5R4	Q7L1T6	521 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	SESTD1	Q86VW0	696 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	DHX37	Q8IY37	1157 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	STAG2	Q8N3U4	1231 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	C7orf31	Q8N865	590 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	NCOA7	Q8NI08	942 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	AFAP1L1	Q8TED9	768 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MAP3K20	Q9NYL2	800 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GTF3C3	Q9Y5Q9	886 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	VCAN	P13611	3396 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PTPRS	Q13332	1948 aa		10.11	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	KIF28P	B7ZC32	967 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	EIF3J	O75822	258 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	F2	P00734	622 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CA3	P07451	260 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	NR3C2	P08235	984 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CYP21A2	P08686	494 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	ZNF286B	P0CG31	522 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PDE4A	P27815	886 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	HSD17B4	P51659	736 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GHRHR	Q02643	423 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	LAMC2	Q13753	1193 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GRM4	Q14833	912 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	TMEM67	Q5HYA8	995 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GDF6	Q6KF10	455 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	KCNV1	Q6PIU1	500 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	LRRC8D	Q7L1W4	858 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MICALL1	Q8N3F8	863 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	SAMD3	Q8N6K7	520 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	EMID1	Q96A84	441 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PDCD2L	Q9BRP1	358 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GTF2IRD1	Q9UHL9	959 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MAD2L2	Q9UI95	211 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PCDHA1	Q9Y5I3	950 aa		10.1	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MYH7B	A7E2Y1	1941 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PALM3	A6NDB9	673 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GTPBP6	O43824	516 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PARN	O95453	639 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MYOG	P15173	224 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CCND2	P30279	289 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	HOXA13	P31271	388 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PSEN2	P49810	448 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	ADGRE1	Q14246	886 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	MFSD10	Q14728	455 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PGM5	Q15124	567 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CCDC85B	Q15834	202 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	KIAA0753	Q2KHM9	967 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	GNPTAB	Q3T906	1256 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	CATIP	Q7Z7H3	387 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PPTC7	Q8NI37	304 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PHOSPHO2	Q8TCD6	241 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	PIGS	Q96S52	555 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	ALG1	Q9BT22	464 aa		10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	DDX41	Q9UJV9	622 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-229	ENST00000583697	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697		E7EWF7	191 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	OPLAH	O14841	1288 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	TLL1	O43897	1013 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	PPP1R11	O60927	126 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	GGPS1	O95749	300 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	POLR2M	P0CAP2	368 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	SELP	P16109	830 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	UBA1	P22314	1058 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	CHML	P26374	656 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	SKIV2L	Q15477	1246 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	CNKSR3	Q6P9H4	555 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	FCHSD1	Q86WN1	690 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	HERC6	Q8IVU3	1022 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	CTCFL	Q8NI51	663 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	VWCE	Q96DN2	955 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	MTMR8	Q96EF0	704 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	SPATA33	Q96N06	139 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	MLXIP	Q9HAP2	919 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	PRDM6	Q9NQX0	595 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	HDAC6	Q9UBN7	1215 aa		10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	SEC63	Q9UGP8	760 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-229	ENST00000583697	SI	P14410	1827 aa		10.07	□□□□□ -0.8

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