RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 PRDM1O75626 825 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 NDUFV1P49821 464 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 ZXDAP98168 799 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 TFAP4Q01664 338 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 CLUL1Q15846 466 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
CASC3-208ENST00000583649 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
CASC3-208ENST00000583649 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 MMP3P08254 477 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 GPNMBQ14956 572 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 CTC1Q2NKJ3 1217 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
CASC3-208ENST00000583649 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
CASC3-208ENST00000583649 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
CASC3-208ENST00000583649 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
CASC3-208ENST00000583649 MYH4Q9Y623 1939 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 UPP2O95045 317 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 CTNNB1P35222 781 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 ZNF618Q5T7W0 954 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 DBF4BQ8NFT6 615 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 DCAF4Q8WV16 495 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 IL17RAQ96F46 866 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
CASC3-208ENST00000583649 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
CASC3-208ENST00000583649 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 ZNF318Q5VUA4 2279 aa13.12□□□□□ -0.31
CASC3-208ENST00000583649 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 NFIBO00712 420 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 KDM4AO75164 1064 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
CASC3-208ENST00000583649 EDNRBP24530 442 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 AVPR2P30518 371 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 LTBRP36941 435 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 THPOP40225 353 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 ID4P47928 161 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 PSEN2P49810 448 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 SNAP25P60880 206 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
CASC3-208ENST00000583649 APBB2Q92870 758 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 COPS5Q92905 334 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 MAF1Q9H063 256 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
CASC3-208ENST00000583649 FSD2A1L4K1 749 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
CASC3-208ENST00000583649 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 CAND2O75155 1236 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
CASC3-208ENST00000583649 HYAL1Q12794 435 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 MFSD10Q14728 455 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 APPBP2Q92624 585 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
CASC3-208ENST00000583649 EYA4O95677 639 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 BMPR1AP36894 532 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
CASC3-208ENST00000583649 STXBP2Q15833 593 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 ZBTB33Q86T24 672 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 NAPBQ9H115 298 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
CASC3-208ENST00000583649 LOC730098B7Z3J9 87 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 H0Y858 1186 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 GPAA1O43292 621 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 F2P00734 622 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 GNAT1P11488 350 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 CCDC62Q6P9F0 684 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 RGS22Q8NE09 1264 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
CASC3-208ENST00000583649 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
CASC3-208ENST00000583649 KAT2BQ92831 832 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms