RNA–Protein interactions for RNA: ENST00000583458.5

RBFOX3-211, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RBFOX3, Length 2,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-211ENST00000583458 PCDHA4Q9UN74 947 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 FLT1P17948 1338 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 LCA5LO95447 670 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 FGRP09769 529 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 CYP2D6P10635 497 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 NR1D1P20393 614 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 RNASE9P60153 205 aaKnown RBP17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 PTGISQ16647 500 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 RNF187Q5TA31 235 aaPredicted RBP17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 SLC39A2Q9NP94 309 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 CCDC155Q8N6L0 562 aa17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
RBFOX3-211ENST00000583458 CICQ96RK0 1608 aaPredicted RBP17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 PPP1R37O75864 691 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 CALML3P27482 149 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 CASKIN2Q8WXE0 1202 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 CCT8L2Q96SF2 557 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 ATXN2Q99700 1313 aaKnown RBP17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 M0R2N6 131 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 CABP7Q86V35 215 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
RBFOX3-211ENST00000583458 MYL1P05976 194 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 IFT88Q13099 833 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 MYCBPAPQ8TBZ2 947 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 BAP1Q92560 729 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 KRT12Q99456 494 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 PACSIN2Q9UNF0 486 aaPredicted RBP17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 FTCDO95954 541 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 CFAP221Q4G0U5 840 aa17.18■□□□□ 0.34
RBFOX3-211ENST00000583458 A6NNZ2 444 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 VPS72Q15906 364 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 SLC35G1Q2M3R5 365 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 ASTE1Q2TB18 679 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 TUBB8Q3ZCM7 444 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 MTMR7Q9Y216 660 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 PJA2O43164 708 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 HPDP32754 393 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 PAK2Q13177 524 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 NOX5Q96PH1 765 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 GLE1Q53GS7 698 aaKnown RBP17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 ATP6V1G3Q96LB4 118 aa17.17■□□□□ 0.34
RBFOX3-211ENST00000583458 NUP98P52948 1817 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 E7EVH7 732 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 PALMO75781 387 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 HGSNATQ68CP4 663 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 PPANQ9NQ55 473 aaKnown RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 TSPY2A6NKD2 308 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 DDR1Q08345 913 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 TDRD12Q587J7 1177 aaKnown RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 CEP85LQ5SZL2 805 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 CCDC13Q8IYE1 715 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 ZKSCAN4Q969J2 545 aaPredicted RBP17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 CENPHQ9H3R5 247 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
RBFOX3-211ENST00000583458 SPRED3Q2MJR0 410 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 CENPPQ6IPU0 288 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 SPATS2Q86XZ4 545 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 OR2W6PQ8NHA6 318 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 CCDC47Q96A33 483 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 VCPKMTQ9H867 229 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 HSPA1LP34931 641 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 ACTN3Q08043 901 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 EMC10Q5UCC4 262 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 MICALCLQ6ZW33 695 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 HEATR3Q7Z4Q2 680 aa17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 YTHDF3Q7Z739 585 aaKnown RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 CD302Q8IX05 232 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms