RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 HDAC6Q9UBN7 1215 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 GTF2IRD1Q9UHL9 959 aa14.45□□□□□ -0.1
TOP3A-215ENST00000583328 WDR19Q8NEZ3 1342 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 FOXP2O15409 715 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 PDHBP11177 359 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 DGKDQ16760 1214 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 PUS10Q3MIT2 529 aaKnown RBP14.44□□□□□ -0.1
TOP3A-215ENST00000583328 USH1GQ495M9 461 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 TCP11L1Q9NUJ3 509 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 CTNNA3Q9UI47 895 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 INSL6Q9Y581 213 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 BRWD1Q9NSI6 2320 aa14.44□□□□□ -0.1
TOP3A-215ENST00000583328 GRXCR2A6NFK2 248 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 FGRP09769 529 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 PSEN2P49810 448 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 MRE11P49959 708 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 RRP1P56182 461 aaKnown RBP14.43□□□□□ -0.1
TOP3A-215ENST00000583328 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 PTK7Q13308 1070 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 PTPROQ16827 1216 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 VPS53Q5VIR6 699 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 RGS22Q8NE09 1264 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 TAAR1Q96RJ0 339 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 C17orf80Q9BSJ5 609 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 KATNAL1Q9BW62 490 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 REV3LO60673 3130 aa14.43□□□□□ -0.1
TOP3A-215ENST00000583328 H3BQ06 376 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-215ENST00000583328 LGR5O75473 907 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 AMHP03971 560 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 ALX1Q15699 326 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 STXBP2Q15833 593 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 ZNF618Q5T7W0 954 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
TOP3A-215ENST00000583328 EP400NLQ6ZTU2 488 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 MYOCDQ8IZQ8 938 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 NSUN6Q8TEA1 469 aaKnown RBP14.42□□□□□ -0.1
TOP3A-215ENST00000583328 TBC1D5Q92609 795 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 MRPL38Q96DV4 380 aaKnown RBP14.42□□□□□ -0.1
TOP3A-215ENST00000583328 LCTP09848 1927 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 TRANK1O15050 2925 aa14.42□□□□□ -0.1
TOP3A-215ENST00000583328 DCXO43602 365 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-215ENST00000583328 MFSD10Q14728 455 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 KIAA0753Q2KHM9 967 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 TRIM71Q2Q1W2 868 aaKnown RBP14.41□□□□□ -0.1
TOP3A-215ENST00000583328 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 SYTL5Q8TDW5 730 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-215ENST00000583328 OTUD7AQ8TE49 926 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-215ENST00000583328 TTC14Q96N46 770 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 IWS1Q96ST2 819 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 UBA5Q9GZZ9 404 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 FAM50BQ9Y247 325 aa14.41□□□□□ -0.1
TOP3A-215ENST00000583328 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 FGAP02671 866 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 GOLGA8HP0CJ92 632 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 NHLH1Q02575 133 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 LAMC2Q13753 1193 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 EPC2Q52LR7 807 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 TIGD5Q53EQ6 642 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 GPATCH4Q5T3I0 446 aaKnown RBP14.4□□□□□ -0.1
TOP3A-215ENST00000583328 ARHGEF16Q5VV41 709 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 TRAF7Q6Q0C0 670 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 MCF2L2Q86YR7 1114 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 DHX37Q8IY37 1157 aaKnown RBP14.4□□□□□ -0.1
TOP3A-215ENST00000583328 BANK1Q8NDB2 785 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 DBF4BQ8NFT6 615 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 WNT8BQ93098 351 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 SAMD11Q96NU1 681 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 MAF1Q9H063 256 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 DDX41Q9UJV9 622 aaKnown RBP14.4□□□□□ -0.1
TOP3A-215ENST00000583328 MRVI1Q9Y6F6 885 aa14.4□□□□□ -0.1
TOP3A-215ENST00000583328 TRIP12Q14669 1992 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-215ENST00000583328 POTEB3A0JP26 581 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 RSPH10B2B2RC85 870 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 HAS3O00219 553 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 RSPH10BP0C881 870 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 THPOP40225 353 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 HTRA4P83105 476 aaPredicted RBP14.39□□□□□ -0.11
TOP3A-215ENST00000583328 GPM6BQ13491 265 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 MBTPS1Q14703 1052 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 POTEBQ6S5H4 581 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 PPTC7Q8NI37 304 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 FBXL18Q96ME1 805 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 YME1L1Q96TA2 773 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 CPVLQ9H3G5 476 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 HELLSQ9NRZ9 838 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 COL20A1Q9P218 1284 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 ABCB11O95342 1321 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 EMSYQ7Z589 1322 aa14.39□□□□□ -0.11
TOP3A-215ENST00000583328 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
TOP3A-215ENST00000583328 F2P00734 622 aa14.38□□□□□ -0.11
TOP3A-215ENST00000583328 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms