RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SLC25A27	O95847	323 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	PGK2	P07205	417 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	ZNF806	P0C7X5	589 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	TDGF1	P13385	188 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	SELP	P16109	830 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	RFX1	P22670	979 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	DNAJB1	P25685	340 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	ITIH3	Q06033	890 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	PTPN11	Q06124	597 aa	Predicted RBP	6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	DIXDC1	Q155Q3	683 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	DUSP6	Q16828	381 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	C4orf17	Q53FE4	359 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	NFRKB	Q6P4R8	1299 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	LRRC8D	Q7L1W4	858 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	FAM181A	Q8N9Y4	354 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	MKNK1	Q9BUB5	465 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	KATNBL1	Q9H079	304 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	CYP26B1	Q9NR63	512 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	PDZD2	O15018	2839 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	PLXNB3	Q9ULL4	1909 aa		6.33	□□□□□ -1.4
MSI2-216	ENST00000582772	KIF26A	Q9ULI4	1882 aa	Predicted RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	BOD1L1	Q8NFC6	3051 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	FOCAD	Q5VW36	1801 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772		B8ZZF3	427 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	EOMES	O95936	686 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	ZNF76	P36508	570 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	USP14	P54578	494 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	JAG1	P78504	1218 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	RBM10	P98175	930 aa	Known RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	SCAP	Q12770	1279 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	CHAF1A	Q13111	956 aa	Predicted RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	NEUROD2	Q15784	382 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	TLK2	Q86UE8	772 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	NCAPG2	Q86XI2	1143 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	MYOCD	Q8IZQ8	938 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	FIBCD1	Q8N539	461 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	C12orf50	Q8NA57	414 aa	Predicted RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	MMP19	Q99542	508 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	MYD88	Q99836	296 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	MYL10	Q9BUA6	226 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	OSBPL6	Q9BZF3	934 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	TANGO6	Q9C0B7	1094 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	KIAA1683	Q9H0B3	1180 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	ADAM7	Q9H2U9	754 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	CCDC86	Q9H6F5	360 aa	Known RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	HYPK	Q9NX55	129 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	IGSF9	Q9P2J2	1179 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	RAX	Q9Y2V3	346 aa		6.32	□□□□□ -1.4
MSI2-216	ENST00000582772	LOXHD1	Q8IVV2	1947 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	FRAT2	O75474	233 aa	Predicted RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	ELAVL4	P26378	380 aa	Known RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	MTHFR	P42898	656 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	NRL	P54845	237 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	STARD6	P59095	220 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	SH3PXD2A	Q5TCZ1	1133 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	PCSK4	Q6UW60	755 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	METTL16	Q86W50	562 aa	Known RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	SPPL3	Q8TCT6	385 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	LIN37	Q96GY3	246 aa	Predicted RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	CRELD1	Q96HD1	420 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	CTAGE1	Q96RT6	745 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	BCO2	Q9BYV7	579 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	PRORY	Q9H606	182 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	TLE6	Q9H808	572 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	KCNK12	Q9HB15	430 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	ARHGEF3	Q9NR81	526 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	HOXC10	Q9NYD6	342 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	NXF1	Q9UBU9	619 aa	Known RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	ZBTB21	Q9ULJ3	1066 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772		Q9Y3F1	56 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	PAXBP1	Q9Y5B6	917 aa		6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	SPTBN1	Q01082	2364 aa	Known RBP	6.31	□□□□□ -1.4
MSI2-216	ENST00000582772	ADGRA3	Q8IWK6	1321 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	CENPE	Q02224	2701 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	DNAJC25-GNG10	A0A024R161	153 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	ANKRD18B	A2A2Z9	1011 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772		H0Y626	953 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	NARS	O43776	548 aa	Known RBP	6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	TRIM16	O95361	564 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	ITGB1	P05556	798 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	HOXB7	P09629	217 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	MCAM	P43121	646 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	COG2	Q14746	738 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	SF3A2	Q15428	464 aa	Known RBP	6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	LPAL2	Q16609	132 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	KIAA1841	Q6NSI8	718 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	POTEH	Q6S545	545 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	RBM23	Q86U06	439 aa	Known RBP	6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	SCUBE3	Q8IX30	993 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	POM121	Q96HA1	1249 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	DDX23	Q9BUQ8	820 aa	Known RBP	6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	FOXD4L1	Q9NU39	408 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	TSPYL4	Q9UJ04	414 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	MYH7B	A7E2Y1	1941 aa		6.3	□□□□□ -1.4
MSI2-216	ENST00000582772	MUC22	E2RYF6	1773 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	PYCARD-AS1	I3L0S3	204 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	PER1	O15534	1290 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	SRF	P11831	508 aa		6.29	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms