RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 SLFN13Q68D06 897 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CNGA4Q8IV77 575 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NOA1Q8NC60 698 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 LARP4BQ92615 738 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PARD6BQ9BYG5 372 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ZNF263O14978 683 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ZMYND10O75800 440 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PRPHP41219 470 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CASP5P51878 434 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PRR16Q569H4 304 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 FCHSD1Q86WN1 690 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ACER1Q8TDN7 264 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CALML4Q96GE6 196 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 GDAP1L1Q96MZ0 367 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 C7orf25Q9BPX7 421 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 OGFRQ9NZT2 677 aa11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ZBTB5O15062 677 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MED24O75448 989 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NDUFA10O95299 355 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PNMA6AP0CW24 399 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CCNE1P24864 410 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PLA2G4AP47712 749 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KCNB1Q14721 858 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PTPROQ16827 1216 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MIGA2Q7L4E1 593 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 RAD54LQ92698 747 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MASTLQ96GX5 879 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PLEKHA4Q9H4M7 779 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 RIC8AQ9NPQ8 531 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 EHD2Q9NZN4 543 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CCP110O43303 1012 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KIF5CO60282 957 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 HLA-DOAP06340 250 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CLK2P49760 499 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 DNA2P51530 1060 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ICA1Q05084 483 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MMRN2Q9H8L6 949 aa11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 EPN1Q9Y6I3 576 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-225ENST00000582482 SFI1A8K8P3 1242 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 FAM86B1E9PN63 330 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 F5H6K3 240 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NDUFB10O96000 172 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 FAM86B2P0C5J1 330 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KLRC3Q07444 240 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CYP26C1Q6V0L0 522 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KSR1Q8IVT5 923 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 GSPT2Q8IYD1 628 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CUL5Q93034 780 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NLRC4Q9NPP4 1024 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ITIH6Q6UXX5 1313 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 MEIS2O14770 477 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CHMP2AO43633 222 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ARID5AQ03989 594 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.52e-7■■■□□ 15.2
CDK5RAP3-225ENST00000582482 STIM1Q13586 685 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 FKBP15Q5T1M5 1219 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ANKRD20A12PQ8NF67 263 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 TTYH3Q9C0H2 523 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ANKZF1Q9H8Y5 726 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PLIN4Q96Q06 1357 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 OPLAHO14841 1288 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 TPM1P09493 284 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CENPFP49454 3210 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KCNA1Q09470 495 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 COASYQ13057 564 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 OR8K1Q8NGG5 319 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 THAP9Q9H5L6 903 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 ERICH4A6NGS2 130 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 LAD1O00515 517 aa11.91□□□□□ -0.5
CDK5RAP3-225ENST00000582482 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms