RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	TTC22	Q5TAA0	569 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	GDF6	Q6KF10	455 aa	Predicted RBP	13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	ALG1	Q9BT22	464 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	AMN	Q9BXJ7	453 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	SENP2	Q9HC62	589 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PXMP2	Q9NR77	195 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	MAD2L2	Q9UI95	211 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	MRVI1	Q9Y6F6	885 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	TAF6L	Q9Y6J9	622 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	KIAA1217	Q5T5P2	1943 aa		13.54	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	TANC1	Q9C0D5	1861 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	RFXAP	O00287	272 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	CA3	P07451	260 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	NR3C2	P08235	984 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PFKM	P08237	780 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	ZNF286B	P0CG31	522 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	ACTN1	P12814	892 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	TRDN	Q13061	729 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PIBF1	Q8WXW3	757 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	KAT2B	Q92831	832 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	IWS1	Q96ST2	819 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	DDX41	Q9UJV9	622 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PCDHA11	Q9Y5I1	949 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PCDHA1	Q9Y5I3	950 aa		13.53	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	TRIP12	Q14669	1992 aa	Predicted RBP	13.52	□□□□□ -0.24
CDK5RAP3-223	ENST00000582114	PITPNM1	O00562	1244 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	IFIT3	O14879	490 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	ZBTB5	O15062	677 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CYP21A2	P08686	494 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CAST	P20810	708 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	HSD17B4	P51659	736 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PTPN11	Q06124	597 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	BFSP2	Q13515	415 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	DGKD	Q16760	1214 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SLC35G1	Q2M3R5	365 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	TMEM67	Q5HYA8	995 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	TJAP1	Q5JTD0	557 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	IL31RA	Q8NI17	732 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	DHX38	Q92620	1227 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SYMPK	Q92797	1274 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CTAGE1	Q96RT6	745 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PIGS	Q96S52	555 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	HDAC6	Q9UBN7	1215 aa		13.52	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	TET1	Q8NFU7	2136 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PALM3	A6NDB9	673 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	EIF3J	O75822	258 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	ARHGEF15	O94989	841 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CHML	P26374	656 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	RFC2	P35250	354 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PSEN2	P49810	448 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	ZNF200	P98182	395 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	FCHSD1	Q86WN1	690 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	DHX37	Q8IY37	1157 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	C7orf31	Q8N865	590 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	MTMR8	Q96EF0	704 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PDCD2L	Q9BRP1	358 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	THEG	Q9P2T0	379 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114		U3KPZ7	1027 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	MYH7B	A7E2Y1	1941 aa		13.51	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	REV3L	O60673	3130 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	EPOP	A6NHQ4	379 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	RGS20	O76081	388 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	MFSD10	Q14728	455 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	GRM4	Q14833	912 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PGM5	Q15124	567 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	KIAA0753	Q2KHM9	967 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	KRT40	Q6A162	431 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	STOX1	Q6ZVD7	989 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	RALYL	Q86SE5	291 aa	Known RBP	13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CCDC155	Q8N6L0	562 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	PPTC7	Q8NI37	304 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	RUFY2	Q8WXA3	655 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SLC9A7	Q96T83	725 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	MAF1	Q9H063	256 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	GTF2IRD1	Q9UHL9	959 aa		13.5	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	ERICH2	A1L162	156 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114		E7EWF7	191 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CYTH3	O43739	400 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	GGPS1	O95749	300 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CKB	P12277	381 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SELP	P16109	830 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SP2	Q02086	613 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	LAMC2	Q13753	1193 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	GPNMB	Q14956	572 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	WTAP	Q15007	396 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SKIV2L	Q15477	1246 aa	Known RBP	13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	TCTN1	Q2MV58	587 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	LRRC8D	Q7L1W4	858 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SPRED2	Q7Z698	418 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SESTD1	Q86VW0	696 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	HERC6	Q8IVU3	1022 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	CAGE1	Q8TC20	777 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	AFAP1L1	Q8TED9	768 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	ARNTL2	Q8WYA1	636 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	WNT8B	Q93098	351 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	SPATA33	Q96N06	139 aa		13.49	□□□□□ -0.25
CDK5RAP3-223	ENST00000582114	KATNAL1	Q9BW62	490 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms