RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 TGFB3P10600 412 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 PSMC6P62333 389 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 PTPN11Q06124 597 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 PGM5Q15124 567 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 LY6KQ17RY6 165 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 NFRKBQ6P4R8 1299 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 TMTC3Q6ZXV5 915 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 LRRC2Q9BYS8 371 aa19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 SEC63Q9UGP8 760 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-206ENST00000581014 EPB41L2O43491 1005 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 B4GALT4O60513 344 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 SUPT20HL2P0C7V6 817 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 RCAN1P53805 252 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 PPIGQ13427 754 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 LAMC2Q13753 1193 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 TMEM199Q8N511 208 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 AFG1LQ8WV93 481 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 TRPV6Q9H1D0 765 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
CDC42EP4-206ENST00000581014 STAM2O75886 525 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 MMP3P08254 477 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 HOXD8P13378 290 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 CCND2P30279 289 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 HSPA4P34932 840 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 SMAD3P84022 425 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 APOA5Q6Q788 366 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 TEX2Q8IWB9 1127 aa19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 NOC4LQ9BVI4 516 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-206ENST00000581014 MEIS2O14770 477 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 RXRAP19793 462 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 NBPF20Q3BBV1 942 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 XRRA1Q6P2D8 792 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 C16orf59Q7L2K0 433 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 SESTD1Q86VW0 696 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 FCHSD1Q86WN1 690 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 FBXL16Q8N461 479 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 IL31RAQ8NI17 732 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 PPTC7Q8NI37 304 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 HIPK3Q9H422 1215 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 RBM28Q9NW13 759 aaKnown RBP19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 MTMR10Q9NXD2 777 aa19.57■□□□□ 0.72
CDC42EP4-206ENST00000581014 REC8O95072 547 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 CSF2RAP15509 400 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 CASTP20810 708 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 ICAM3P32942 547 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 DGKDQ16760 1214 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 MICU3Q86XE3 530 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 CMTR1Q8N1G2 835 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 INPP4AQ96PE3 977 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 PPP1R12CQ9BZL4 782 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
CDC42EP4-206ENST00000581014 SCN10AQ9Y5Y9 1956 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 PPFIA4O75335 1185 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 CYP2C18P33260 490 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 FUT2Q10981 343 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 TMEM240Q5SV17 173 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 KAT2BQ92831 832 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 CUL5Q93034 780 aa19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 RNPC3Q96LT9 517 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 TRMT13Q9NUP7 481 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-206ENST00000581014 ZBTB43O43298 467 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 GNPTABQ3T906 1256 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 PCNX4Q63HM2 1172 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 USP17L6PQ6QN14 398 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 DHX37Q8IY37 1157 aaKnown RBP19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 SMARCC2Q8TAQ2 1214 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 PSTPIP2Q9H939 334 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 STXBP5LQ9Y2K9 1186 aa19.54■□□□□ 0.72
CDC42EP4-206ENST00000581014 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 UBA1P22314 1058 aaKnown RBP19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 SP2Q02086 613 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 RTN1Q16799 776 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 SLC17A8Q8NDX2 589 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 WNT8AQ9H1J5 351 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 GBF1Q92538 1859 aa19.53■□□□□ 0.72
CDC42EP4-206ENST00000581014 UMODL1Q5DID0 1318 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 HAS3O00219 553 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 PITPNM1O00562 1244 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 F2P00734 622 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 ZNF697Q5TEC3 545 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 FAM161BQ96MY7 647 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 KATNAL1Q9BW62 490 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 AGXT2Q9BYV1 514 aa19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 FAM217BQ9NTX9 383 aaPredicted RBP19.52■□□□□ 0.72
CDC42EP4-206ENST00000581014 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms