RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 NR3C2P08235 984 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 ACRP10323 421 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 EIF2AK2P19525 551 aaKnown RBP14.48□□□□□ -0.09
SENP3-204ENST00000580997 ARHGAP1Q07960 439 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 LY6KQ17RY6 165 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 SEPT14Q6ZU15 432 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 CHST3Q7LGC8 479 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 VSIG10LQ86VR7 867 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 PIGSQ96S52 555 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
SENP3-204ENST00000580997 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
SENP3-204ENST00000580997 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 RGS20O76081 388 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 FGBP02675 491 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 DNAJB2P25686 324 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 CCL23P55773 120 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 CATIPQ7Z7H3 387 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 AFG1LQ8WV93 481 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 PDCD2LQ9BRP1 358 aa14.47□□□□□ -0.09
SENP3-204ENST00000580997 SCN10AQ9Y5Y9 1956 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 MMP3P08254 477 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 CYP2C9P11712 490 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 NECTIN1Q15223 517 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 SESTD1Q86VW0 696 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 HOMER1Q86YM7 354 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 RPUSD2Q8IZ73 545 aaKnown RBP14.46□□□□□ -0.09
SENP3-204ENST00000580997 TMTC2Q8N394 836 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 KAT2BQ92831 832 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 ESYT1Q9BSJ8 1104 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 PBX4Q9BYU1 374 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 CXXC1Q9P0U4 656 aaPredicted RBP14.46□□□□□ -0.09
SENP3-204ENST00000580997 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
SENP3-204ENST00000580997 VCANP13611 3396 aa14.46□□□□□ -0.1
SENP3-204ENST00000580997 GCOM1H8Y6P7 765 aaPredicted RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 POLR2MP0CAP2 368 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 TGFB3P10600 412 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 CASTP20810 708 aaKnown RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 MCM5P33992 734 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 LAMC2Q13753 1193 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 PGM5Q15124 567 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 DGKDQ16760 1214 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 BMP2KLQ5H9B9 411 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 KCNV1Q6PIU1 500 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 PPTC7Q8NI37 304 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 TIFAQ96CG3 184 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 SPZ1Q9BXG8 430 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 MTIF3Q9H2K0 278 aaKnown RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 ZNF576Q9H609 170 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
SENP3-204ENST00000580997 MRVI1Q9Y6F6 885 aa14.45□□□□□ -0.1
SENP3-204ENST00000580997 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 SLC27A2O14975 620 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 PRC1O43663 620 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 DDAH1O94760 285 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 PFKMP08237 780 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 HOXD8P13378 290 aaPredicted RBP14.44□□□□□ -0.1
SENP3-204ENST00000580997 KIF5BP33176 963 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 PBX2P40425 430 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 LIFRP42702 1097 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 COL9A3Q14050 684 aaPredicted RBP14.44□□□□□ -0.1
SENP3-204ENST00000580997 GRIN2CQ14957 1233 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 MYSM1Q5VVJ2 828 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 CENPQQ7L2Z9 268 aaPredicted RBP14.44□□□□□ -0.1
SENP3-204ENST00000580997 OTOP2Q7RTS6 562 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 ZNF654Q8IZM8 581 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 MYLIPQ8WY64 445 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 SCLYQ96I15 445 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 TMEM87BQ96K49 555 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 CTAGE1Q96RT6 745 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
SENP3-204ENST00000580997 FRMPD4Q14CM0 1322 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 SPTBN5Q9NRC6 3674 aaKnown RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 HAS3O00219 553 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 SH2B2O14492 632 aaPredicted RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 IQCF3P0C7M6 154 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 MYCLP12524 364 aaPredicted RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 RFC2P35250 354 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 SP2Q02086 613 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 FAM47CQ5HY64 1035 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 LCE2DQ5TA82 110 aaPredicted RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 CREB3L3Q68CJ9 461 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 DHX37Q8IY37 1157 aaKnown RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 IL31RAQ8NI17 732 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 CTCFLQ8NI51 663 aaPredicted RBP14.43□□□□□ -0.1
SENP3-204ENST00000580997 PPP1R13LQ8WUF5 828 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 MYH6P13533 1939 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 KIAA1217Q5T5P2 1943 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 CHD7Q9P2D1 2997 aa14.43□□□□□ -0.1
SENP3-204ENST00000580997 PIK3CDO00329 1044 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 DLL1O00548 723 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 STAM2O75886 525 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 F2P00734 622 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 CCND2P30279 289 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 BFSP2Q13515 415 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms