RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.45
SUPT4H1-204ENST00000580947 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.45
SUPT4H1-204ENST00000580947 MMP3P08254 477 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 HOXD8P13378 290 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 KIF5BP33176 963 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 TRAF1Q13077 416 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 PGM5Q15124 567 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 RASIP1Q5U651 963 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 KAT2BQ92831 832 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 CTAGE1Q96RT6 745 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 LZTS2Q9BRK4 669 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 MTG1Q9BT17 334 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 WNT8AQ9H1J5 351 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
SUPT4H1-204ENST00000580947 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 MEIS2O14770 477 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 TLR3O15455 904 aaKnown RBP12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 KPNA6O60684 536 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 MYL3P08590 195 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 CSF2RAP15509 400 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 CYP2C18P33260 490 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 MRPS9P82933 396 aaKnown RBP12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 SP2Q02086 613 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 FUT2Q10981 343 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 FAM109BQ6ICB4 259 aaPredicted RBP12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 APOA5Q6Q788 366 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 TMTC3Q6ZXV5 915 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 RAB11FIP4Q86YS3 637 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 DEFB123Q8N688 67 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 TCEANC2Q96MN5 208 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■□□□ 12.2
SUPT4H1-204ENST00000580947 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 TRMT13Q9NUP7 481 aaKnown RBP12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 BRPF3Q9ULD4 1205 aa12.25□□□□□ -0.45
SUPT4H1-204ENST00000580947 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 GH1P01241 217 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 CALM1P0DP23 149 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 CALM2P0DP24 149 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 CALM3P0DP25 149 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 SIP14410 1827 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 HSPA4P34932 840 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 GNAQP50148 359 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 NFRKBQ6P4R8 1299 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 NFXL1Q6ZNB6 911 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 DHX32Q7L7V1 743 aaKnown RBP12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 PPP1R13LQ8WUF5 828 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
SUPT4H1-204ENST00000580947 MICAL3Q7RTP6 2002 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 LOXHD1Q8IVV2 1947 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 MYCLP12524 364 aaPredicted RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 SMAD3P84022 425 aaKnown RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 PTPN11Q06124 597 aaPredicted RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 PPIGQ13427 754 aaKnown RBP eCLIP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 BRDTQ58F21 947 aaPredicted RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 MYSM1Q5VVJ2 828 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 SESTD1Q86VW0 696 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 FCHSD1Q86WN1 690 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 RNPC3Q96LT9 517 aaKnown RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 MRVI1Q9Y6F6 885 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 VCANP13611 3396 aa12.23□□□□□ -0.45
SUPT4H1-204ENST00000580947 NID2Q14112 1375 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 HAS3O00219 553 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 F2P00734 622 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 ACRP10323 421 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 CYP2C9P11712 490 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 CPA1P15085 419 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 UBA1P22314 1058 aaKnown RBP12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 CCND2P30279 289 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 ICAM3P32942 547 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 KRT32Q14532 448 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 TMEM199Q8N511 208 aa12.22□□□□□ -0.45
SUPT4H1-204ENST00000580947 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms