RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 ZNF214Q9UL59 606 aaPredicted RBP5.54□□□□□ -1.52
SMG8-205ENST00000580798 LTBP3Q9NS15 1303 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 A0A087WZG4 1122 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 NPEPPSL1A6NEC2 478 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 NTRK1P04629 796 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 ITGA1P56199 1179 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 PPP2R5DQ14738 602 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 R3HDM1Q15032 1099 aaKnown RBP5.53□□□□□ -1.52
SMG8-205ENST00000580798 CD300LDQ6UXZ3 194 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
SMG8-205ENST00000580798 NAP1L5Q96NT1 182 aaPredicted RBP5.53□□□□□ -1.52
SMG8-205ENST00000580798 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
SMG8-205ENST00000580798 C9orf118A6NHY6 69 aa5.52□□□□□ -1.53
SMG8-205ENST00000580798 STXBP3O00186 592 aa5.52□□□□□ -1.53
SMG8-205ENST00000580798 ZEB1P37275 1124 aaPredicted RBP5.52□□□□□ -1.53
SMG8-205ENST00000580798 CIR1Q86X95 450 aaPredicted RBP5.52□□□□□ -1.53
SMG8-205ENST00000580798 RNF34Q969K3 372 aa5.52□□□□□ -1.53
SMG8-205ENST00000580798 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
SMG8-205ENST00000580798 DEF6Q9H4E7 631 aa5.52□□□□□ -1.53
SMG8-205ENST00000580798 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMG8-205ENST00000580798 DDX41Q9UJV9 622 aaKnown RBP5.52□□□□□ -1.53
SMG8-205ENST00000580798 VAMP4O75379 141 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 TGM1P22735 817 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
SMG8-205ENST00000580798 TCEAL1Q15170 157 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 PLEKHH3Q7Z736 793 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 MIB1Q86YT6 1006 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 ADCY4Q8NFM4 1077 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 IGDCC4Q8TDY8 1250 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 ZNF428Q96B54 188 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 MBD6Q96DN6 1003 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 HAUS7Q99871 368 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 GINM1Q9NU53 330 aa5.51□□□□□ -1.53
SMG8-205ENST00000580798 C7orf72A4D263 438 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 RECKO95980 971 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 FUCA1P04066 466 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 ZNF28P17035 718 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 SEPHS1P49903 392 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 SELENOPP49908 381 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 DPY19L1Q2PZI1 675 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 SPDYAQ5MJ70 313 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 DCP2Q8IU60 420 aaKnown RBP5.5□□□□□ -1.53
SMG8-205ENST00000580798 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 WHRNQ9P202 907 aa5.5□□□□□ -1.53
SMG8-205ENST00000580798 C2orf71A6NGG8 1288 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 MUSKO15146 869 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 SGSM2O43147 1006 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 NCLP19338 710 aaKnown RBP5.49□□□□□ -1.53
SMG8-205ENST00000580798 SOX9P48436 509 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 EPHB4P54760 987 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 PAK2Q13177 524 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 ZC3H18Q86VM9 953 aaKnown RBP5.49□□□□□ -1.53
SMG8-205ENST00000580798 CRBNQ96SW2 442 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 PTPN18Q99952 460 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 PCDHB10Q9UN67 800 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 EFR3BQ9Y2G0 817 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 TCAF1Q9Y4C2 921 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 BACE2Q9Y5Z0 518 aa5.49□□□□□ -1.53
SMG8-205ENST00000580798 NPHP3-ACAD11A0A0J9YXS1 232 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 PATE3B3GLJ2 98 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 NPHS1O60500 1241 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 CYP1A1P04798 512 aaPredicted RBP5.48□□□□□ -1.53
SMG8-205ENST00000580798 EPHX1P07099 455 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 PAMP19021 973 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 PPP2CBP62714 309 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 PPP2CAP67775 309 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 ADAM9Q13443 819 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 COL9A2Q14055 689 aaPredicted RBP5.48□□□□□ -1.53
SMG8-205ENST00000580798 GNPTABQ3T906 1256 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 PRAMEF18Q5VWM3 479 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 ZNF654Q8IZM8 581 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 C11orf21Q9P2W6 132 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 TESMINQ9Y4I5 508 aa5.48□□□□□ -1.53
SMG8-205ENST00000580798 A0A1W2PQH9 124 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 CENPBP07199 599 aaPredicted RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 GIPRP48546 466 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 EIF6P56537 245 aaKnown RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 FHL2Q14192 279 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 HEATR6Q6AI08 1181 aaKnown RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 PKN3Q6P5Z2 889 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 C19orf47Q8N9M1 422 aaKnown RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 KLHL6Q8WZ60 621 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 FGD4Q96M96 766 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 YTHDC1Q96MU7 727 aaKnown RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 AP5M1Q9H0R1 490 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 GBP3Q9H0R5 595 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 SEMA4AQ9H3S1 761 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
SMG8-205ENST00000580798 SLC12A7Q9Y666 1083 aa5.47□□□□□ -1.53
SMG8-205ENST00000580798 SCAMP3O14828 347 aaKnown RBP5.46□□□□□ -1.54
SMG8-205ENST00000580798 ZNF623O75123 536 aa5.46□□□□□ -1.54
SMG8-205ENST00000580798 STAT5AP42229 794 aa5.46□□□□□ -1.54
SMG8-205ENST00000580798 TGFB2P61812 414 aa5.46□□□□□ -1.54
SMG8-205ENST00000580798 CR1LQ2VPA4 569 aa5.46□□□□□ -1.54
SMG8-205ENST00000580798 MBLAC2Q68D91 279 aa5.46□□□□□ -1.54
SMG8-205ENST00000580798 ARHGEF18Q6ZSZ5 1173 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms