RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 APOBRQ0VD83 1088 aa30.95■■■□□ 2.55
LINC00271-207ENST00000580741 USP17L6PQ6QN14 398 aa30.95■■■□□ 2.55
LINC00271-207ENST00000580741 FAM126BQ8IXS8 530 aa30.95■■■□□ 2.55
LINC00271-207ENST00000580741 POLR3EQ9NVU0 708 aa30.95■■■□□ 2.55
LINC00271-207ENST00000580741 RBM28Q9NW13 759 aaKnown RBP30.95■■■□□ 2.55
LINC00271-207ENST00000580741 SZT2Q5T011 3432 aa30.95■■■□□ 2.55
LINC00271-207ENST00000580741 RGS20O76081 388 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 RAG1P15918 1043 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 PURAQ00577 322 aaKnown RBP30.94■■■□□ 2.54
LINC00271-207ENST00000580741 ARHGAP1Q07960 439 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 VSIG10LQ86VR7 867 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 SLC43A3Q8NBI5 491 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 GPKOWQ92917 476 aaPredicted RBP eCLIP30.94■■■□□ 2.54
LINC00271-207ENST00000580741 BRF1Q92994 677 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 TBX21Q9UL17 535 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 MRVI1Q9Y6F6 885 aa30.94■■■□□ 2.54
LINC00271-207ENST00000580741 GH1P01241 217 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 CASTP20810 708 aaKnown RBP30.93■■■□□ 2.54
LINC00271-207ENST00000580741 RPS6KB1P23443 525 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 CDC27P30260 824 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 CCND2P30279 289 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 BRDTQ58F21 947 aaPredicted RBP30.93■■■□□ 2.54
LINC00271-207ENST00000580741 HEATR3Q7Z4Q2 680 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 SMARCC2Q8TAQ2 1214 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 PPP1R13LQ8WUF5 828 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 AFG1LQ8WV93 481 aa30.93■■■□□ 2.54
LINC00271-207ENST00000580741 FAM217BQ9NTX9 383 aaPredicted RBP30.93■■■□□ 2.54
LINC00271-207ENST00000580741 DDX41Q9UJV9 622 aaKnown RBP30.93■■■□□ 2.54
LINC00271-207ENST00000580741 KIAA1217Q5T5P2 1943 aa30.92■■■□□ 2.54
LINC00271-207ENST00000580741 A6NJR5 290 aa30.92■■■□□ 2.54
LINC00271-207ENST00000580741 CUL5Q93034 780 aa30.92■■■□□ 2.54
LINC00271-207ENST00000580741 LRCH3Q96II8 777 aa30.92■■■□□ 2.54
LINC00271-207ENST00000580741 MTG1Q9BT17 334 aaPredicted RBP30.92■■■□□ 2.54
LINC00271-207ENST00000580741 USP26Q9BXU7 913 aa30.92■■■□□ 2.54
LINC00271-207ENST00000580741 MEIS2O14770 477 aa30.91■■■□□ 2.54
LINC00271-207ENST00000580741 TLR3O15455 904 aaKnown RBP30.91■■■□□ 2.54
LINC00271-207ENST00000580741 FUT2Q10981 343 aa30.91■■■□□ 2.54
LINC00271-207ENST00000580741 FRMPD4Q14CM0 1322 aa30.91■■■□□ 2.54
LINC00271-207ENST00000580741 SORBS3O60504 671 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 CD4P01730 458 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 PSMA5P28066 241 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 UBE2SQ16763 222 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 TRPV6Q9H1D0 765 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 PSTPIP2Q9H939 334 aa30.9■■■□□ 2.54
LINC00271-207ENST00000580741 PIK3CDO00329 1044 aa30.89■■■□□ 2.54
LINC00271-207ENST00000580741 MMP3P08254 477 aa30.89■■■□□ 2.54
LINC00271-207ENST00000580741 METAP2P50579 478 aaKnown RBP eCLIP30.89■■■□□ 2.54
LINC00271-207ENST00000580741 C9orf50Q5SZB4 431 aa30.89■■■□□ 2.54
LINC00271-207ENST00000580741 WWC2Q6AWC2 1192 aa30.89■■■□□ 2.54
LINC00271-207ENST00000580741 PPP1R12CQ9BZL4 782 aa30.89■■■□□ 2.54
LINC00271-207ENST00000580741 V9GY48 417 aaPredicted RBP30.89■■■□□ 2.54
LINC00271-207ENST00000580741 EPB41L2O43491 1005 aaKnown RBP30.88■■■□□ 2.53
LINC00271-207ENST00000580741 B4GALT4O60513 344 aa30.88■■■□□ 2.53
LINC00271-207ENST00000580741 ADD1P35611 737 aaKnown RBP30.88■■■□□ 2.53
LINC00271-207ENST00000580741 MRPS9P82933 396 aaKnown RBP30.88■■■□□ 2.53
LINC00271-207ENST00000580741 TIMP1P01033 207 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 RCAN1P53805 252 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 EPHB4P54760 987 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 CHMP4BP1P59074 171 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 SHHQ15465 462 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 NBPF20Q3BBV1 942 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 RTEL1Q9NZ71 1219 aa30.87■■■□□ 2.53
LINC00271-207ENST00000580741 KPNA6O60684 536 aa30.86■■■□□ 2.53
LINC00271-207ENST00000580741 LRIT3Q3SXY7 679 aa30.86■■■□□ 2.53
LINC00271-207ENST00000580741 FAM47CQ5HY64 1035 aa30.86■■■□□ 2.53
LINC00271-207ENST00000580741 TYW1BQ6NUM6 668 aa30.86■■■□□ 2.53
LINC00271-207ENST00000580741 DHX37Q8IY37 1157 aaKnown RBP30.86■■■□□ 2.53
LINC00271-207ENST00000580741 ALDH8A1Q9H2A2 487 aaPredicted RBP30.86■■■□□ 2.53
LINC00271-207ENST00000580741 SCN10AQ9Y5Y9 1956 aa30.85■■■□□ 2.53
LINC00271-207ENST00000580741 UBA1P22314 1058 aaKnown RBP30.85■■■□□ 2.53
LINC00271-207ENST00000580741 SP2Q02086 613 aa30.85■■■□□ 2.53
LINC00271-207ENST00000580741 FPGSQ05932 587 aa30.85■■■□□ 2.53
LINC00271-207ENST00000580741 SEZ6LQ9BYH1 1024 aa30.85■■■□□ 2.53
LINC00271-207ENST00000580741 AGXT2Q9BYV1 514 aa30.85■■■□□ 2.53
LINC00271-207ENST00000580741 TRMT13Q9NUP7 481 aaKnown RBP30.85■■■□□ 2.53
LINC00271-207ENST00000580741 GGPS1O95749 300 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 CYP2C18P33260 490 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 NAPAP54920 295 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 LAMC2Q13753 1193 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 RUFY3Q7L099 469 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 EMID1Q96A84 441 aaPredicted RBP30.84■■■□□ 2.53
LINC00271-207ENST00000580741 ZSWIM6Q9HCJ5 1215 aa30.84■■■□□ 2.53
LINC00271-207ENST00000580741 UMODL1Q5DID0 1318 aa30.83■■■□□ 2.53
LINC00271-207ENST00000580741 CELF3Q5SZQ8 465 aaKnown RBP30.83■■■□□ 2.53
LINC00271-207ENST00000580741 MYSM1Q5VVJ2 828 aa30.83■■■□□ 2.53
LINC00271-207ENST00000580741 KCNV1Q6PIU1 500 aa30.83■■■□□ 2.53
LINC00271-207ENST00000580741 FBXL16Q8N461 479 aa30.83■■■□□ 2.53
LINC00271-207ENST00000580741 INPP4AQ96PE3 977 aaPredicted RBP30.83■■■□□ 2.53
LINC00271-207ENST00000580741 UPF3BQ9BZI7 483 aaKnown RBP30.83■■■□□ 2.53
LINC00271-207ENST00000580741 BCAS3Q9H6U6 928 aa30.83■■■□□ 2.53
LINC00271-207ENST00000580741 STXBP3O00186 592 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 SEMA3FQ13275 785 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 GNPTABQ3T906 1256 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 PCNX4Q63HM2 1172 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 MFSD5Q6N075 450 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 PPTC7Q8NI37 304 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 KAT2BQ92831 832 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 HIPK3Q9H422 1215 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 CYP46A1Q9Y6A2 500 aa30.82■■■□□ 2.52
LINC00271-207ENST00000580741 NID2Q14112 1375 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms