RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ASGR1P07306 291 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 SCG2P13521 617 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 NKX3-2P78367 333 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 STK3Q13188 491 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 PKN1Q16512 942 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 GNASQ5JWF2 1037 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 FBXO16Q8IX29 292 aaPredicted RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 TDHQ8IZJ6 230 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 CCDC12Q8WUD4 166 aaPredicted RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 PRDM5Q9NQX1 630 aaPredicted RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 STARD7Q9NQZ5 370 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 SH3GLB2Q9NR46 395 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 GNEQ9Y223 722 aaKnown RBP11.37□□□□□ -0.59
GGA3-209ENST00000580646 UNC80Q8N2C7 3258 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 ELP1O95163 1332 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 STXBP3O00186 592 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
GGA3-209ENST00000580646 CTDNEP1O95476 244 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 SMPD1P17405 629 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 WWC2Q6AWC2 1192 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 SH3RF1Q7Z6J0 888 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
GGA3-209ENST00000580646 WASF1Q92558 559 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 TBC1D5Q92609 795 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 PHKBQ93100 1093 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 SLC26A6Q9BXS9 759 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
GGA3-209ENST00000580646 MYH7BA7E2Y1 1941 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 B4DLN1 442 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 GCOM1H8Y6P7 765 aaPredicted RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 PQBP1O60828 265 aaKnown RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 CLTBP09497 229 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 POLR2MP0CAP2 368 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 NAPAP54920 295 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 BEX3Q00994 111 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 PDE4DQ08499 809 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 ST3GAL1Q11201 340 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 MCTP2Q6DN12 878 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 TLK2Q86UE8 772 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 CCDC148Q8NFR7 591 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 SYTL5Q8TDW5 730 aaPredicted RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 PIBF1Q8WXW3 757 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 SNX21Q969T3 373 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 TRIM43Q96BQ3 446 aaPredicted RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 TOX2Q96NM4 488 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
GGA3-209ENST00000580646 ZMYND12Q9H0C1 365 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 Q9Y3F1 56 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 FRMPD4Q14CM0 1322 aa11.35□□□□□ -0.59
GGA3-209ENST00000580646 hCG_1642624A0A1W2PR95 340 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
GGA3-209ENST00000580646 DCDC2CA8MYV0 355 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 MEIS2O14770 477 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 KIAA0355O15063 1070 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 ZEB2O60315 1214 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
GGA3-209ENST00000580646 CFBP00751 764 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 PTGS1P23219 599 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 EDNRBP24530 442 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 GNA11P29992 359 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 CDK7P50613 346 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
GGA3-209ENST00000580646 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
GGA3-209ENST00000580646 LRIT3Q3SXY7 679 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 DUSP28Q4G0W2 176 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 NECAB1Q8N987 351 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
GGA3-209ENST00000580646 BADQ92934 168 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 CUL5Q93034 780 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 TMX3Q96JJ7 454 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 TAAR1Q96RJ0 339 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 RIC8AQ9NPQ8 531 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 TMEM39AQ9NV64 488 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 VCANP13611 3396 aa11.34□□□□□ -0.59
GGA3-209ENST00000580646 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
GGA3-209ENST00000580646 ARVCFO00192 962 aa11.33□□□□□ -0.6
GGA3-209ENST00000580646 CABYRO75952 493 aa11.33□□□□□ -0.6
GGA3-209ENST00000580646 FOSP01100 380 aaPredicted RBP11.33□□□□□ -0.6
GGA3-209ENST00000580646 XBP1P17861 261 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms