RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PDGFCQ9NRA1 345 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 CABYRO75952 493 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 PLEKHA8P1O95397 391 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 SMPD1P17405 629 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 PTGS1P23219 599 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 FSCN1Q16658 493 aaKnown RBP28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 PSRC1Q6PGN9 363 aaPredicted RBP28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 APOA5Q6Q788 366 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 USP38Q8NB14 1042 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 AP5M1Q9H0R1 490 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 CHD9Q3L8U1 2897 aa28.72■■■□□ 2.19
CDC42EP4-205ENST00000580315 DYNC1LI2O43237 492 aaPredicted RBP28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 HSD17B4P51659 736 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 GHRHRQ02643 423 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 ARHGEF16Q5VV41 709 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 SRBD1Q8N5C6 995 aaKnown RBP28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 IWS1Q96ST2 819 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 RBM28Q9NW13 759 aaKnown RBP28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 COL20A1Q9P218 1284 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 Q9Y3F1 56 aa28.71■■■□□ 2.19
CDC42EP4-205ENST00000580315 GRIN2DO15399 1336 aa28.7■■■□□ 2.19
CDC42EP4-205ENST00000580315 GCOM1H8Y6P7 765 aaPredicted RBP28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 OPLAHO14841 1288 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 ZBTB43O43298 467 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 POLR2MP0CAP2 368 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 ITGA7Q13683 1181 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 WDR11Q9BZH6 1224 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 IL23AQ9NPF7 189 aa28.7■■■□□ 2.18
CDC42EP4-205ENST00000580315 LCTP09848 1927 aa28.69■■■□□ 2.18
CDC42EP4-205ENST00000580315 DUSP28Q4G0W2 176 aa28.69■■■□□ 2.18
CDC42EP4-205ENST00000580315 TMTC3Q6ZXV5 915 aa28.69■■■□□ 2.18
CDC42EP4-205ENST00000580315 USP26Q9BXU7 913 aa28.69■■■□□ 2.18
CDC42EP4-205ENST00000580315 HIPK3Q9H422 1215 aa28.69■■■□□ 2.18
CDC42EP4-205ENST00000580315 KLF18A0A0U1RQI7 1052 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 RBM47A0AV96 593 aaKnown RBP28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 ZEB2O60315 1214 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 STXBP2Q15833 593 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 TMEM63BQ5T3F8 832 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 CMTR1Q8N1G2 835 aaKnown RBP28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 SCFD2Q8WU76 684 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 HERVK_113Q902F9 699 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 SYMPKQ92797 1274 aaKnown RBP28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 BRPF3Q9ULD4 1205 aa28.68■■■□□ 2.18
CDC42EP4-205ENST00000580315 LRRC37A2A6NM11 1700 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 CPA1P15085 419 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 RPS6KB1P23443 525 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 RCAN1P53805 252 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 RTN1Q16799 776 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 Q6ZUG5 572 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 CCDC82Q8N4S0 544 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 SEZ6LQ9BYH1 1024 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 PXMP2Q9NR77 195 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 CXXC1Q9P0U4 656 aaPredicted RBP28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 NAP1L2Q9ULW6 460 aaPredicted RBP28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 UMODL1Q5DID0 1318 aa28.67■■■□□ 2.18
CDC42EP4-205ENST00000580315 GOLGA8AA7E2F4 631 aa28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 GOLGA8BA8MQT2 603 aa28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 NKRFO15226 690 aaKnown RBP eCLIP28.66■■■□□ 2.189e-9■■□□□ 13
CDC42EP4-205ENST00000580315 EIF2AK2P19525 551 aaKnown RBP28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 CASTP20810 708 aaKnown RBP28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 HOXA13P31271 388 aaPredicted RBP28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 PPP2R5BQ15173 497 aa28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 TRPV6Q9H1D0 765 aa28.66■■■□□ 2.18
CDC42EP4-205ENST00000580315 EIF5BO60841 1220 aaKnown RBP28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 FGBP02675 491 aa28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 PSMC6P62333 389 aa28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 TTLL4Q14679 1199 aa28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 GAS2L1Q99501 681 aaPredicted RBP28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 NOC4LQ9BVI4 516 aaKnown RBP28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 PRDM12Q9H4Q4 367 aa28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 MYH6P13533 1939 aa28.65■■■□□ 2.18
CDC42EP4-205ENST00000580315 B4GALT4O60513 344 aa28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 NR3C2P08235 984 aa28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 BRF1Q92994 677 aa28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 CUL5Q93034 780 aa28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 MTIF3Q9H2K0 278 aaKnown RBP28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 MSRAQ9UJ68 235 aa28.64■■■□□ 2.18
CDC42EP4-205ENST00000580315 EIF3JO75822 258 aaKnown RBP28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 TXNP10599 105 aaKnown RBP28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 CCL23P55773 120 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 RAB30Q15771 203 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 TJAP1Q5JTD0 557 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 FCHSD1Q86WN1 690 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 FBXL16Q8N461 479 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 MUC3AQ02505 3323 aa28.63■■■□□ 2.17
CDC42EP4-205ENST00000580315 CCDC196A0A1B0GTZ2 297 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 METAP2P50579 478 aaKnown RBP eCLIP28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 APOBRQ0VD83 1088 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 BRDTQ58F21 947 aaPredicted RBP28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 SEPT14Q6ZU15 432 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 OTOP2Q7RTS6 562 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 OR6J1Q8NGC5 347 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 PDCD2LQ9BRP1 358 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 WNT8AQ9H1J5 351 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 PRDM6Q9NQX0 595 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 CYP46A1Q9Y6A2 500 aa28.62■■■□□ 2.17
CDC42EP4-205ENST00000580315 CPT1AP50416 773 aa28.61■■■□□ 2.17
CDC42EP4-205ENST00000580315 RUFY3Q7L099 469 aa28.61■■■□□ 2.17
CDC42EP4-205ENST00000580315 SMARCC2Q8TAQ2 1214 aa28.61■■■□□ 2.17
CDC42EP4-205ENST00000580315 PPM1EQ8WY54 764 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms