RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CERKL	Q49MI3	558 aa	Predicted RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	CXCL17	Q6UXB2	119 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	NOL8	Q76FK4	1167 aa	Known RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	SPRED2	Q7Z698	418 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	MAPKAPK5	Q8IW41	473 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	RETREG2	Q8NC44	543 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	BANK1	Q8NDB2	785 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	ACER1	Q8TDN7	264 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	TGFBRAP1	Q8WUH2	860 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	NSUN4	Q96CB9	384 aa	Known RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	MRPL38	Q96DV4	380 aa	Known RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	DDX11	Q96FC9	970 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	C1QTNF2	Q9BXJ5	285 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	RAI14	Q9P0K7	980 aa		7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	TPR	P12270	2363 aa	Known RBP	7.33	□□□□□ -1.24
KPNB1-209	ENST00000580158	TNKS	O95271	1327 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	LCHN	A4D1U4	455 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	MBTPS2	O43462	519 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	SNAI1	O95863	264 aa	Predicted RBP	7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	BEX3	Q00994	111 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	RASGRF1	Q13972	1273 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	RALBP1	Q15311	655 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	CCDC27	Q2M243	656 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.32	□□□□□ -1.24	1e-7	■■■□□ 16.5
KPNB1-209	ENST00000580158	MAMDC4	Q6UXC1	1216 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	RIOX2	Q8IUF8	465 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	CCDC116	Q8IYX3	515 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	RMDN1	Q96DB5	314 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	VWCE	Q96DN2	955 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	RAD9A	Q99638	391 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	ALG13	Q9NP73	1137 aa	Known RBP	7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	TRIO	O75962	3097 aa		7.32	□□□□□ -1.24
KPNB1-209	ENST00000580158	FLT1	P17948	1338 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	LINC01553	A4QN01	128 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	STAT3	P40763	770 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	NKX3-2	P78367	333 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	PDE4D	Q08499	809 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	TMEM132B	Q14DG7	1078 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	ACAP1	Q15027	740 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	TATDN1	Q6P1N9	297 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	PKD1L2	Q7Z442	2459 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	ANKRD44	Q8N8A2	993 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	ATG4C	Q96DT6	458 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	AP5M1	Q9H0R1	490 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	NSUN3	Q9H649	340 aa	Known RBP	7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	LRP2BP	Q9P2M1	347 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	SAP30BP	Q9UHR5	308 aa	Known RBP	7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	SERPINB13	Q9UIV8	391 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	DNMT3L	Q9UJW3	386 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	MYO7A	Q13402	2215 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	MYO10	Q9HD67	2058 aa		7.31	□□□□□ -1.24
KPNB1-209	ENST00000580158	MICAL3	Q7RTP6	2002 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	RALGAPA2	Q2PPJ7	1873 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	MYO5A	Q9Y4I1	1855 aa	Known RBP	7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	TTLL8	A6PVC2	850 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	GJB5	O95377	273 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	IQCF3	P0C7M6	154 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	CYP2C9	P11712	490 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	TNFAIP2	Q03169	654 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	SMAD4	Q13485	552 aa	Known RBP	7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	BFSP2	Q13515	415 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	CLUL1	Q15846	466 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	FSCN1	Q16658	493 aa	Known RBP	7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	TCEAL5	Q5H9L2	206 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	ATG9A	Q7Z3C6	839 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	FRMD5	Q7Z6J6	570 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	RPAIN	Q86UA6	219 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	ZNF384	Q8TF68	577 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	SAMD11	Q96NU1	681 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	PGPEP1	Q9NXJ5	209 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	EPG5	Q9HCE0	2579 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	NAV1	Q8NEY1	1877 aa		7.3	□□□□□ -1.24
KPNB1-209	ENST00000580158	GRIN2D	O15399	1336 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	ATG2A	Q2TAZ0	1938 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	MYO15A	Q9UKN7	3530 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	MPHOSPH10	O00566	681 aa	Known RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	CTAGE5	O15320	804 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	ADCY6	O43306	1168 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	CIAO1	O76071	339 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	ADORA1	P30542	326 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	WDR5	P61964	334 aa	Known RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	PSMC6	P62333	389 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	GPM6B	Q13491	265 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	MVP	Q14764	893 aa	Known RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	NAA16	Q6N069	864 aa	Predicted RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	TTC6	Q86TZ1	520 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	TLK2	Q86UE8	772 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	MAGEB6	Q8N7X4	407 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	SPATA5	Q8NB90	893 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	KCNG4	Q8TDN1	519 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	CHAMP1	Q96JM3	812 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	SH2D4A	Q9H788	454 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	TRMT13	Q9NUP7	481 aa	Known RBP	7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	INSL6	Q9Y581	213 aa		7.29	□□□□□ -1.24
KPNB1-209	ENST00000580158	FIGNL2	A6NMB9	653 aa		7.28	□□□□□ -1.24

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