RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 EPC2Q52LR7 807 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 TTBK2Q6IQ55 1244 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 RPAINQ86UA6 219 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 SESTD1Q86VW0 696 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 MYOCDQ8IZQ8 938 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 AFG1LQ8WV93 481 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 CLEC4DQ8WXI8 215 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 TXNP10599 105 aaKnown RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 EDNRBP24530 442 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 PTPN5P54829 565 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 HTRA4P83105 476 aaPredicted RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 DLX2Q07687 328 aaPredicted RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 GPM6BQ13491 265 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 IKBKEQ14164 716 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 PTPROQ16827 1216 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 TRIM71Q2Q1W2 868 aaKnown RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 HERC4Q5GLZ8 1057 aaPredicted RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 ZNF618Q5T7W0 954 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 HDAC6Q9UBN7 1215 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 GTF2IRD1Q9UHL9 959 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 FAM50BQ9Y247 325 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 RIF1Q5UIP0 2472 aaKnown RBP10.98□□□□□ -0.65
SMARCD2-208ENST00000580054 FAM186AA6NE01 2351 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 LOC102724159A0A0B4J2E5 919 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 H3BNC9 293 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 GFRA3O60609 400 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 APPP05067 770 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 RPS6P62753 249 aaKnown RBP10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 ZNF200P98182 395 aaPredicted RBP10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 PDE4BQ07343 736 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 ARHGAP1Q07960 439 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 PWP2Q15269 919 aaKnown RBP10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 RNF207Q6ZRF8 634 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 APPBP2Q92624 585 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 LRRCC1Q9C099 1032 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 ZNF287Q9HBT7 754 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 ALG13Q9NP73 1137 aaKnown RBP10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 CTNNA3Q9UI47 895 aa10.97□□□□□ -0.65
SMARCD2-208ENST00000580054 MYH6P13533 1939 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 KIAA1671Q9BY89 1806 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 TMEM221A6NGB7 291 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 M0R296 226 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 MBTPS2O43462 519 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 EFCAB14O75071 495 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 TBX10O75333 385 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 LGR5O75473 907 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 CSPG5O95196 566 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 PARNO95453 639 aaKnown RBP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 AMHP03971 560 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 ZNF286BP0CG31 522 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 PPARAQ07869 468 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 HIC1Q14526 733 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 SMAD2Q15796 467 aaKnown RBP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 SYDE2Q5VT97 1194 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 CCDC62Q6P9F0 684 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 FBXO11Q86XK2 927 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 ALG1Q9BT22 464 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 UPF3BQ9BZI7 483 aaKnown RBP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 CHMP4BQ9H444 224 aaKnown RBP10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
SMARCD2-208ENST00000580054 DCHS1Q96JQ0 3298 aa10.96□□□□□ -0.66
SMARCD2-208ENST00000580054 PSEN2P49810 448 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 PTK7Q13308 1070 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 TSHZ3Q63HK5 1081 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 KBTBD3Q8NAB2 608 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 EDAQ92838 391 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 PBXIP1Q96AQ6 731 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 SAMD11Q96NU1 681 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 YME1L1Q96TA2 773 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 OSBPL7Q9BZF2 842 aa10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCD2-208ENST00000580054 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 STXBP3O00186 592 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 RNF113AO15541 343 aaKnown RBP10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 LINC01565O15544 149 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms