RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 GCOM1H8Y6P7 765 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 OPLAHO14841 1288 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 EIF3JO75822 258 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 POLR2MP0CAP2 368 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CASTP20810 708 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 HSD17B4P51659 736 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 BFSP2Q13515 415 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PTGISQ16647 500 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 DGKDQ16760 1214 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 STOX1Q6ZVD7 989 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 DHX37Q8IY37 1157 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ZFP91Q96JP5 570 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PDCD2LQ9BRP1 358 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ALG1Q9BT22 464 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SLC28A3Q9HAS3 691 aa10.68□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PFKMP08237 780 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 IQCF3P0C7M6 154 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ACTN1P12814 892 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ATP2A2P16615 1042 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 IGFBP4P22692 258 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CCND2P30279 289 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PTPN11Q06124 597 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 TRAF1Q13077 416 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PGM5Q15124 567 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PPP2R2DQ66LE6 453 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 C7orf31Q8N865 590 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MTMR8Q96EF0 704 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PRC1O43663 620 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CYTH3O43739 400 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 GGPS1O95749 300 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MYOGP15173 224 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RFC2P35250 354 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PSEN2P49810 448 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ANTXR2P58335 489 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 TROAPQ12815 778 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 LAMC2Q13753 1193 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SLC35G1Q2M3R5 365 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 GDF6Q6KF10 455 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MB21D2Q8IYB1 491 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 IL31RAQ8NI17 732 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PPTC7Q8NI37 304 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CTCFLQ8NI51 663 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KAT2BQ92831 832 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KATNAL1Q9BW62 490 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RIOX1Q9H6W3 641 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MYH6P13533 1939 aa10.66□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CCDC69A6NI79 296 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RXRAP19793 462 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KIF5BP33176 963 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MFSD10Q14728 455 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CCDC85BQ15834 202 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KIAA0753Q2KHM9 967 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KCNV1Q6PIU1 500 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RAB11FIP4Q86YS3 637 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MICALL1Q8N3F8 863 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 USP38Q8NB14 1042 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 VWCEQ96DN2 955 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MLXIPQ9HAP2 919 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RTEL1Q9NZ71 1219 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 HDAC6Q9UBN7 1215 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SEC63Q9UGP8 760 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 GTF2IRD1Q9UHL9 959 aa10.65□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RGS20O76081 388 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 DDAH1O94760 285 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 UBA1P22314 1058 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MCM5P33992 734 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 KCNJ6P48051 423 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GHRHRQ02643 423 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 HSDL1Q3SXM5 330 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CELF3Q5SZQ8 465 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LRRC8DQ7L1W4 858 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 VSIG10LQ86VR7 867 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SESTD1Q86VW0 696 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CMTR1Q8N1G2 835 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
CDK5RAP3-211ENST00000578996 AFAP1L1Q8TED9 768 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms