RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 MTRQ99707 1265 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 NAP1L4Q99733 375 aaKnown RBP22.76■■□□□ 1.23
SMG8-203ENST00000578922 ZMYND15Q9H091 742 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 FAM86B1E9PN63 330 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 FAM86B2P0C5J1 330 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 BMP6P22004 513 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 NF2P35240 595 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 ZNF76P36508 570 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 FXR2P51116 673 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMG8-203ENST00000578922 TPD52L1Q16890 204 aaPredicted RBP22.76■■□□□ 1.23
SMG8-203ENST00000578922 MUM1L1Q5H9M0 696 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 LRRC15Q8TF66 581 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 C12orf42Q96LP6 360 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 MMTAG2Q9BU76 263 aaKnown RBP22.76■■□□□ 1.23
SMG8-203ENST00000578922 KCND1Q9NSA2 647 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 IMPACTQ9P2X3 320 aa22.76■■□□□ 1.23
SMG8-203ENST00000578922 PLCG1P19174 1290 aa22.75■■□□□ 1.23
SMG8-203ENST00000578922 NAALADL2Q58DX5 795 aa22.75■■□□□ 1.23
SMG8-203ENST00000578922 SMAP1Q8IYB5 467 aaPredicted RBP22.75■■□□□ 1.23
SMG8-203ENST00000578922 CLEC4DQ8WXI8 215 aa22.75■■□□□ 1.23
SMG8-203ENST00000578922 OTUD5Q96G74 571 aa22.75■■□□□ 1.23
SMG8-203ENST00000578922 C16orf45Q96MC5 204 aaPredicted RBP22.75■■□□□ 1.23
SMG8-203ENST00000578922 PYM1Q9BRP8 204 aaKnown RBP22.75■■□□□ 1.23
SMG8-203ENST00000578922 CYP3A7-CYP3A51PA0A087WV96 503 aa22.74■■□□□ 1.23
SMG8-203ENST00000578922 CYP3A7P24462 503 aa22.74■■□□□ 1.23
SMG8-203ENST00000578922 OTOFQ9HC10 1997 aa22.74■■□□□ 1.23
SMG8-203ENST00000578922 SARSP49591 514 aaKnown RBP22.74■■□□□ 1.23
SMG8-203ENST00000578922 PCDHA12Q9UN75 941 aa22.74■■□□□ 1.23
SMG8-203ENST00000578922 SMC2O95347 1197 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 FMR1Q06787 632 aaKnown RBP eCLIP22.73■■□□□ 1.239e-6■■■■□ 20.6
SMG8-203ENST00000578922 DPYDQ12882 1025 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 CUL4BQ13620 913 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 PDCL2Q8N4E4 241 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 RAB34Q9BZG1 259 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 NT5DC1Q5TFE4 455 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 MAP1SQ66K74 1059 aaPredicted RBP22.73■■□□□ 1.23
SMG8-203ENST00000578922 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 MBOAT7Q96N66 472 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 NUDT12Q9BQG2 462 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 KCNMB3Q9NPA1 279 aa22.73■■□□□ 1.23
SMG8-203ENST00000578922 DSG3P32926 999 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 COG2Q14746 738 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 TREML2Q5T2D2 321 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 MOXD1Q6UVY6 613 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 SNX29Q8TEQ0 813 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 LENG9Q96B70 501 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 TRERF1Q96PN7 1200 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 ZNF408Q9H9D4 720 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 COL20A1Q9P218 1284 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 RIPK3Q9Y572 518 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 IRF6O14896 467 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 SKILP12757 684 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 STAT3P40763 770 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 TPM4P67936 248 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 PDIA5Q14554 519 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 PNMA8AQ86V59 439 aaPredicted RBP22.72■■□□□ 1.23
SMG8-203ENST00000578922 ANKRD13AQ8IZ07 590 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 SPATA20Q8TB22 786 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 CALML4Q96GE6 196 aa22.72■■□□□ 1.23
SMG8-203ENST00000578922 TRAF5O00463 557 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 HSD17B4P51659 736 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 MORC3Q14149 939 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 Q4G0T1 1027 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 CCDC112Q8NEF3 446 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 ETNPPLQ8TBG4 499 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 RBM46Q8TBY0 533 aaKnown RBP22.71■■□□□ 1.23
SMG8-203ENST00000578922 SCN4AP35499 1836 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 PARP14Q460N5 1801 aa22.71■■□□□ 1.23
SMG8-203ENST00000578922 GRB10Q13322 594 aa22.7■■□□□ 1.23
SMG8-203ENST00000578922 KRT79Q5XKE5 535 aa22.7■■□□□ 1.23
SMG8-203ENST00000578922 CEP135Q66GS9 1140 aa22.7■■□□□ 1.23
SMG8-203ENST00000578922 SNRNP48Q6IEG0 339 aaKnown RBP22.7■■□□□ 1.23
SMG8-203ENST00000578922 GADL1Q6ZQY3 521 aa22.7■■□□□ 1.23
SMG8-203ENST00000578922 CDK5RAP3Q96JB5 506 aa22.7■■□□□ 1.23
SMG8-203ENST00000578922 GTPBP6O43824 516 aaPredicted RBP22.7■■□□□ 1.22
SMG8-203ENST00000578922 CYP3A4P08684 503 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 CIITAP33076 1130 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 SH3D19Q5HYK7 790 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 NSMFQ6X4W1 530 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 SLC30A10Q6XR72 485 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 MCF2L2Q86YR7 1114 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 PNMA5Q96PV4 448 aa22.7■■□□□ 1.22
SMG8-203ENST00000578922 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
SMG8-203ENST00000578922 MSH4O15457 936 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 CCZ1BP86790 482 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 CCZ1P86791 482 aaPredicted RBP22.69■■□□□ 1.22
SMG8-203ENST00000578922 PLS1Q14651 629 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 TMEM132BQ14DG7 1078 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 REPS2Q8NFH8 660 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 EHMT1Q9H9B1 1298 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 PAPPA2Q9BXP8 1791 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 WDR90Q96KV7 1748 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 RLFQ13129 1914 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 PEX10O60683 326 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 NYAP1Q6ZVC0 841 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 SLFN12Q8IYM2 578 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 SMYD4Q8IYR2 804 aaPredicted RBP22.69■■□□□ 1.22
SMG8-203ENST00000578922 RNF146Q9NTX7 359 aa22.69■■□□□ 1.22
SMG8-203ENST00000578922 COL11A1P12107 1806 aaPredicted RBP22.68■■□□□ 1.22
SMG8-203ENST00000578922 SPDYE16A6NNV3 312 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms