RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 GH1P01241 217 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 NR3C2P08235 984 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 CYP21A2P08686 494 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 IQCF3P0C7M6 154 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 MYCLP12524 364 aaPredicted RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 ATP2A2P16615 1042 aaKnown RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 STXBP2Q15833 593 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 PTGISQ16647 500 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 TMCO2Q7Z6W1 182 aaPredicted RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 MCF2L2Q86YR7 1114 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 NSUN6Q8TEA1 469 aaKnown RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 GPKOWQ92917 476 aaPredicted RBP eCLIP10.41□□□□□ -0.74
GGA3-207ENST00000578896 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 ALG1Q9BT22 464 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 SEZ6LQ9BYH1 1024 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 MAD2L2Q9UI95 211 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 DDX41Q9UJV9 622 aaKnown RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 MRPL11Q9Y3B7 192 aaKnown RBP10.41□□□□□ -0.74
GGA3-207ENST00000578896 MYO7AQ13402 2215 aa10.41□□□□□ -0.74
GGA3-207ENST00000578896 B4DLN1 442 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 RGS20O76081 388 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 ZNF286BP0CG31 522 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 MRPL12P52815 198 aaKnown RBP10.4□□□□□ -0.74
GGA3-207ENST00000578896 ZNF200P98182 395 aaPredicted RBP10.4□□□□□ -0.74
GGA3-207ENST00000578896 GPNMBQ14956 572 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 TCTN1Q2MV58 587 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 PPP2R2DQ66LE6 453 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 KRT40Q6A162 431 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 NFRKBQ6P4R8 1299 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 STOX1Q6ZVD7 989 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 SPRED2Q7Z698 418 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 FCHSD1Q86WN1 690 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
GGA3-207ENST00000578896 PIGSQ96S52 555 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 HDAC6Q9UBN7 1215 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 BDP1A6H8Y1 2624 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 PTPRSQ13332 1948 aa10.4□□□□□ -0.74
GGA3-207ENST00000578896 DOCK5Q9H7D0 1870 aa10.4□□□□□ -0.75
GGA3-207ENST00000578896 TRANK1O15050 2925 aa10.4□□□□□ -0.75
GGA3-207ENST00000578896 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
GGA3-207ENST00000578896 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 IFIT3O14879 490 aaKnown RBP10.39□□□□□ -0.75
GGA3-207ENST00000578896 KPNA6O60684 536 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 EIF3JO75822 258 aaKnown RBP10.39□□□□□ -0.75
GGA3-207ENST00000578896 CA3P07451 260 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 CHMLP26374 656 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 PSEN2P49810 448 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 HIC1Q14526 733 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 WNT8BQ93098 351 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 PDCD2LQ9BRP1 358 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
GGA3-207ENST00000578896 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 XIRP2A4UGR9 3374 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 E7EWF7 191 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 ZBTB5O15062 677 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 CYTH3O43739 400 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
GGA3-207ENST00000578896 HSD17B4P51659 736 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 SP2Q02086 613 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
GGA3-207ENST00000578896 TRDNQ13061 729 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 BFSP2Q13515 415 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
GGA3-207ENST00000578896 GRM4Q14833 912 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 TMEM67Q5HYA8 995 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 TJAP1Q5JTD0 557 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
GGA3-207ENST00000578896 ARNTL2Q8WYA1 636 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 MTMR8Q96EF0 704 aa10.38□□□□□ -0.75
GGA3-207ENST00000578896 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 GGPS1O95749 300 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 PFKMP08237 780 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 ACTN1P12814 892 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 NT5C2P49902 561 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 ANTXR2P58335 489 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 MFSD10Q14728 455 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 WTAPQ15007 396 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 PGM5Q15124 567 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 DGKDQ16760 1214 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 KIAA0753Q2KHM9 967 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 HSDL1Q3SXM5 330 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 VSIG10LQ86VR7 867 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 RAB11FIP4Q86YS3 637 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 C7orf31Q8N865 590 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 KAT6AQ92794 2004 aa10.37□□□□□ -0.75
GGA3-207ENST00000578896 SPATA33Q96N06 139 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms