RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 M0R2N6 131 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 WNT10BO00744 389 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
RTTN-202ENST00000578780 BMP15O95972 392 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 GH2P01242 217 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 TRAPPC10P48553 1259 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 JAG1P78504 1218 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 SNX1Q13596 522 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 RRP1BQ14684 758 aaKnown RBP11.2□□□□□ -0.62
RTTN-202ENST00000578780 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
RTTN-202ENST00000578780 FKBP1CQ5VVH2 108 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 KCTD1Q719H9 257 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 KLHL23Q8NBE8 558 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 DAGLBQ8NCG7 672 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 CCDC150Q8NCX0 1101 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
RTTN-202ENST00000578780 CCDC194A0A1B0GVG4 234 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 EBAG9O00559 213 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 SLC16A2P36021 539 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 PSMD2Q13200 908 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 ADGRF4Q8IZF3 695 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 KIRREL3Q8IZU9 778 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
RTTN-202ENST00000578780 PARD3BQ8TEW8 1205 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 ZBED3Q96IU2 234 aaPredicted RBP11.19□□□□□ -0.62
RTTN-202ENST00000578780 TMEM39BQ9GZU3 492 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 RAB21Q9UL25 225 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 KCNH3Q9ULD8 1083 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 LTBP3Q9NS15 1303 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 SFPQP23246 707 aaKnown RBP eCLIP11.19□□□□□ -0.62
RTTN-202ENST00000578780 GNA11P29992 359 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 MCM7P33993 719 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 SLC1A4P43007 532 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 PTGDRQ13258 359 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 CASP8Q14790 479 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 HSP90B2PQ58FF3 399 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 WDR24Q96S15 920 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 PNKPQ96T60 521 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
RTTN-202ENST00000578780 hCG_1984214I3L0E3 225 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 PRELPP51888 382 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 SLC5A9Q2M3M2 681 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 ZNF713Q8N859 430 aaPredicted RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 AFAP1L1Q8TED9 768 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 DCAF4Q8WV16 495 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 ACBD3Q9H3P7 528 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 GJA3Q9Y6H8 435 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 VWA3AA6NCI4 1184 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 BECN2A8MW95 431 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 F5H6K3 240 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 CCP110O43303 1012 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 SYF2O95926 243 aaKnown RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
RTTN-202ENST00000578780 KLRC3Q07444 240 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 STX1AQ16623 288 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 LONRF3Q496Y0 759 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 TMC6Q7Z403 805 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 FERMT2Q96AC1 680 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 COA7Q96BR5 231 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
RTTN-202ENST00000578780 A0A087WWV3 80 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 RNF40O75150 1001 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
RTTN-202ENST00000578780 GCKP35557 465 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 INF2Q27J81 1249 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
RTTN-202ENST00000578780 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 ESYT2A0FGR8 921 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
RTTN-202ENST00000578780 FZD9O00144 591 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 POLR2DO15514 142 aaKnown RBP11.17□□□□□ -0.62
RTTN-202ENST00000578780 FSBPO95073 299 aa11.17□□□□□ -0.62
RTTN-202ENST00000578780 EGFRP00533 1210 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms