RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 IWS1Q96ST2 819 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
IFT20-207ENST00000578547 RTEL1Q9NZ71 1219 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
IFT20-207ENST00000578547 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 TDP2O95551 362 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 GRK4P32298 578 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 TRIM32Q13049 653 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
IFT20-207ENST00000578547 NBR1Q14596 966 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 STXBP2Q15833 593 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 TTC38Q5R3I4 469 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
IFT20-207ENST00000578547 TRMT44Q8IYL2 757 aaKnown RBP13.81□□□□□ -0.2
IFT20-207ENST00000578547 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 MCOLN1Q9GZU1 580 aa13.81□□□□□ -0.2
IFT20-207ENST00000578547 WNT7AO00755 349 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
IFT20-207ENST00000578547 SNAI1O95863 264 aaPredicted RBP13.8□□□□□ -0.2
IFT20-207ENST00000578547 EDNRBP24530 442 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 CYP2C19P33261 490 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 MRPS9P82933 396 aaKnown RBP13.8□□□□□ -0.2
IFT20-207ENST00000578547 PRR16Q569H4 304 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
IFT20-207ENST00000578547 MYSM1Q5VVJ2 828 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 SLAIN1Q8ND83 568 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.8□□□□□ -0.2
IFT20-207ENST00000578547 SYNGAP1Q96PV0 1343 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 MCM3APO60318 1980 aa13.8□□□□□ -0.2
IFT20-207ENST00000578547 LOC102724159A0A0B4J2E5 919 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 HMGCRP04035 888 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 CYP3A4P08684 503 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 MCM7P33993 719 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
IFT20-207ENST00000578547 USP11P51784 963 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 PWP2Q15269 919 aaKnown RBP13.79□□□□□ -0.2
IFT20-207ENST00000578547 ZNF174Q15697 407 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 RILPL1Q5EBL4 403 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 VSIG10LQ86VR7 867 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 MSL3Q8N5Y2 521 aaKnown RBP13.79□□□□□ -0.2
IFT20-207ENST00000578547 CYP2W1Q8TAV3 490 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 CRYGNQ8WXF5 182 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
IFT20-207ENST00000578547 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
IFT20-207ENST00000578547 CNPY2Q9Y2B0 182 aa13.79□□□□□ -0.2
IFT20-207ENST00000578547 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 SLC37A4O43826 429 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 EDIL3O43854 480 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 NEMFO60524 1076 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 EIF3JO75822 258 aaKnown RBP13.78□□□□□ -0.2
IFT20-207ENST00000578547 INHAP05111 366 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 ITGB5P18084 799 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
IFT20-207ENST00000578547 TRAPPC10P48553 1259 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 CEBPZQ03701 1054 aaKnown RBP13.78□□□□□ -0.2
IFT20-207ENST00000578547 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
IFT20-207ENST00000578547 MTMR1Q13613 665 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 CEP55Q53EZ4 464 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 PLA2G4DQ86XP0 818 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 TRPV1Q8NER1 839 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 NAP1L4Q99733 375 aaKnown RBP13.78□□□□□ -0.2
IFT20-207ENST00000578547 MXRA8Q9BRK3 442 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
IFT20-207ENST00000578547 PKD2L1Q9P0L9 805 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 UBIAD1Q9Y5Z9 338 aa13.78□□□□□ -0.2
IFT20-207ENST00000578547 IGLV3-22A0A075B6J6 115 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 STAM2O75886 525 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
IFT20-207ENST00000578547 GCFC2P16383 781 aaKnown RBP13.77□□□□□ -0.21
IFT20-207ENST00000578547 CIITAP33076 1130 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 MAP3K21Q5TCX8 1036 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.21
IFT20-207ENST00000578547 INPP4AQ96PE3 977 aaPredicted RBP13.77□□□□□ -0.21
IFT20-207ENST00000578547 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 VTA1Q9NP79 307 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 JADE2Q9NQC1 790 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 TFIP11Q9UBB9 837 aaKnown RBP13.77□□□□□ -0.21
IFT20-207ENST00000578547 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
IFT20-207ENST00000578547 CYP3A7-CYP3A51PA0A087WV96 503 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms