RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TMCO3Q6UWJ1 677 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ZNF662Q6ZS27 426 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SH3BP5LQ7L8J4 393 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 DYMQ7RTS9 669 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KCNK18Q7Z418 384 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SRGAP1Q7Z6B7 1085 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CHP1Q99653 195 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 NT5C3AQ9H0P0 336 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 HAUS4Q9H6D7 363 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KCNQ5Q9NR82 932 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ZNHIT6Q9NWK9 470 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ZNF446Q9NWS9 450 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 REXO2Q9Y3B8 237 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 PCDHAC2Q9Y5I4 1007 aa10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ATRNL1Q5VV63 1379 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SLX4Q8IY92 1834 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SCN9AQ15858 1988 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CYP3A7-CYP3A51PA0A087WV96 503 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 RASSF10A6NK89 507 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 POTEB2H3BUK9 544 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ATP8B1O43520 1251 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SLURP2P0DP57 97 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 IDEP14735 1019 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CYP3A7P24462 503 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 MMP14P50281 582 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 HERVK_113P62684 666 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 TUBB4BP68371 445 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CDK17Q00537 523 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 GABPB1Q06547 395 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 COASYQ13057 564 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ABCB5Q2M3G0 1257 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SYDE2Q5VT97 1194 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 WDR59Q6PJI9 974 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CCDC170Q8IYT3 715 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SUPT20HQ8NEM7 779 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 DDX12PQ92771 950 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 HPS3Q969F9 1004 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 DNAJC19Q96DA6 116 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 PCDHA12Q9UN75 941 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 MYH7BA7E2Y1 1941 aa10.4□□□□□ -0.74
CDK5RAP3-208ENST00000578525 EIF3CLB5ME19 914 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 RAD21O60216 631 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZRANB2O95218 330 aaKnown RBP eCLIP10.39□□□□□ -0.757e-19■□□□□ 10
CDK5RAP3-208ENST00000578525 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KLK7P49862 253 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ECM1Q16610 540 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FAM26FQ5R3K3 315 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZNF772Q68DY9 489 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CC2D2BQ6DHV5 1058 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 LRRC55Q6ZSA7 311 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SIAH1Q8IUQ4 282 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC65Q8IXS2 484 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SLFN12Q8IYM2 578 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MYOCDQ8IZQ8 938 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EIF3CQ99613 913 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 AMNQ9BXJ7 453 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 BMP2KQ9NSY1 1161 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SYNPO2Q9UMS6 1093 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 STK24Q9Y6E0 443 aa10.39□□□□□ -0.75
CDK5RAP3-208ENST00000578525 F5H6K3 240 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PSMD14O00487 310 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TBX3O15119 743 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GDF11O95390 407 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NDUFB10O96000 172 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PLA2G4BP0C869 781 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 HNRNPH3P31942 346 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ARHGAP4P98171 946 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KLRC3Q07444 240 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 DMTNQ08495 405 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 AOC3Q16853 763 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 Q4G0T1 1027 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 RBM26Q5T8P6 1007 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms