RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 CUL5Q93034 780 aa12.61□□□□□ -0.39
PPP4R1-208ENST00000578178 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
PPP4R1-208ENST00000578178 TMEM39AQ9NV64 488 aa12.61□□□□□ -0.39
PPP4R1-208ENST00000578178 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
PPP4R1-208ENST00000578178 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
PPP4R1-208ENST00000578178 NID2Q14112 1375 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 LAMA3Q16787 3333 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 A6NJR5 290 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 PIK3CDO00329 1044 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 GH1P01241 217 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 MYL3P08590 195 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 RAG1P15918 1043 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 PSMA5P28066 241 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 GRIN2DO15399 1336 aa12.6□□□□□ -0.39
PPP4R1-208ENST00000578178 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 hCG_1642624A0A1W2PR95 340 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 KPNA6O60684 536 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 RGS20O76081 388 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 CD4P01730 458 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 MMP3P08254 477 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 ITGB8P26012 769 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 PSMC6P62333 389 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 FUT2Q10981 343 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 USP17L6PQ6QN14 398 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 Q6ZUG5 572 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.394e-7■■□□□ 11.4
PPP4R1-208ENST00000578178 BRF1Q92994 677 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 EMID1Q96A84 441 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 DDX41Q9UJV9 622 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-208ENST00000578178 CCDC196A0A1B0GTZ2 297 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 hCG_1984214I3L0E3 225 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 SOX1O00570 391 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 MEIS2O14770 477 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 STAM2O75886 525 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 CDC27P30260 824 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 FPGSQ05932 587 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 GNPTABQ3T906 1256 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 ZNF713Q8N859 430 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 AFG1LQ8WV93 481 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 USP26Q9BXU7 913 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 PSTPIP2Q9H939 334 aa12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-208ENST00000578178 B4GALT4O60513 344 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 TIMP1P01033 207 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 TGFB3P10600 412 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 PPTC7Q8NI37 304 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 LRCH3Q96II8 777 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
PPP4R1-208ENST00000578178 FIBPO43427 364 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 GGPS1O95749 300 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 NAPAP54920 295 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 MRPS9P82933 396 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 DGKDQ16760 1214 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 UBE2SQ16763 222 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 FAM47CQ5HY64 1035 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 XRRA1Q6P2D8 792 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 NFRKBQ6P4R8 1299 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 TEX2Q8IWB9 1127 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 DHX37Q8IY37 1157 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 HIPK3Q9H422 1215 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 DOCK5Q9H7D0 1870 aa12.56□□□□□ -0.4
PPP4R1-208ENST00000578178 SPDYE3A6NKU9 549 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 STXBP3O00186 592 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 F2P00734 622 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 ICAM3P32942 547 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 ADD1P35611 737 aaKnown RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 PPIGQ13427 754 aaKnown RBP eCLIP12.55□□□□□ -0.42e-10■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 322.4 ms