RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LRWD1Q9UFC0 647 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 PCDHA12Q9UN75 941 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 IGLV3-22A0A075B6J6 115 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 CCL15-CCL14A0A0B4J2E2 113 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 PP2D1A8MPX8 630 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 HUNKP57058 714 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 BAATQ14032 418 aaPredicted RBP20.93■□□□□ 0.94
PRKCA-203ENST00000578063 E2F4Q16254 413 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 CCL15Q16663 113 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 CEP55Q53EZ4 464 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 CABP7Q86V35 215 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 RASSF8Q8NHQ8 419 aa20.93■□□□□ 0.94
PRKCA-203ENST00000578063 CDC25AP30304 524 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 MRE11P49959 708 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 PCNX4Q63HM2 1172 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 TRPM7Q96QT4 1865 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 UBXN2AP68543 259 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 KARSQ15046 597 aaKnown RBP20.92■□□□□ 0.94
PRKCA-203ENST00000578063 POSTNQ15063 836 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 ANKRD23Q86SG2 305 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 TAAR1Q96RJ0 339 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 RMDN3Q96TC7 470 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 PAGR1Q9BTK6 254 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 GRPEL1Q9HAV7 217 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 A1CFQ9NQ94 594 aaKnown RBP20.92■□□□□ 0.94
PRKCA-203ENST00000578063 CYP39A1Q9NYL5 469 aa20.92■□□□□ 0.94
PRKCA-203ENST00000578063 PFASO15067 1338 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 MSH4O15457 936 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 CNMDO75829 334 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 SLC25A27O95847 323 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 STAT6P42226 847 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 ZRSR1Q15695 479 aaKnown RBP20.91■□□□□ 0.94
PRKCA-203ENST00000578063 STX1AQ16623 288 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 RRAGBQ5VZM2 374 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 XRRA1Q6P2D8 792 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 NIPA1Q7RTP0 329 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 PLA2G4DQ86XP0 818 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 CALML4Q96GE6 196 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 MXRA8Q9BRK3 442 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 CUEDC2Q9H467 287 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 PXMP2Q9NR77 195 aa20.91■□□□□ 0.94
PRKCA-203ENST00000578063 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 POTEMA6NI47 508 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MEIS1O00470 390 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 SLC26A4O43511 780 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MDM2Q00987 491 aaPredicted RBP20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MKRN3Q13064 507 aaKnown RBP20.9■□□□□ 0.94
PRKCA-203ENST00000578063 PGM5Q15124 567 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 ARHGEF16Q5VV41 709 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 KRT79Q5XKE5 535 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 CYP2W1Q8TAV3 490 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 BRI3BPQ8WY22 251 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 PDCD2LQ9BRP1 358 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MAGEF1Q9HAY2 307 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 TUBE1Q9UJT0 475 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 CAVIN2O95810 425 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 BCRP11274 1271 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 EIF2AK2P19525 551 aaKnown RBP20.9■□□□□ 0.94
PRKCA-203ENST00000578063 PNOCQ13519 176 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 SH3RF1Q7Z6J0 888 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MMTAG2Q9BU76 263 aaKnown RBP20.9■□□□□ 0.94
PRKCA-203ENST00000578063 MOV10L1Q9BXT6 1211 aaKnown RBP20.9■□□□□ 0.94
PRKCA-203ENST00000578063 RBSNQ9H1K0 784 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 RBPJLQ9UBG7 517 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 STK24Q9Y6E0 443 aa20.9■□□□□ 0.94
PRKCA-203ENST00000578063 BTBD19C9JJ37 291 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 PDHXO00330 501 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.89■□□□□ 0.93
PRKCA-203ENST00000578063 NCAPG2Q86XI2 1143 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 IL31RAQ8NI17 732 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 NSUN6Q8TEA1 469 aaKnown RBP20.89■□□□□ 0.93
PRKCA-203ENST00000578063 SNX29Q8TEQ0 813 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 ERCC4Q92889 916 aaPredicted RBP20.89■□□□□ 0.93
PRKCA-203ENST00000578063 PAGE5Q96GU1 130 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 ANO10Q9NW15 660 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
PRKCA-203ENST00000578063 ANKRD35Q8N283 1001 aa20.88■□□□□ 0.93
PRKCA-203ENST00000578063 SMCR8Q8TEV9 937 aaPredicted RBP20.88■□□□□ 0.93
PRKCA-203ENST00000578063 SLC5A5Q92911 643 aa20.88■□□□□ 0.93
PRKCA-203ENST00000578063 GJA10Q969M2 543 aa20.88■□□□□ 0.93
PRKCA-203ENST00000578063 CDK5RAP3Q96JB5 506 aa20.88■□□□□ 0.93
PRKCA-203ENST00000578063 TXNRD2Q9NNW7 524 aa20.88■□□□□ 0.93
PRKCA-203ENST00000578063 KDM3AQ9Y4C1 1321 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.87■□□□□ 0.93
PRKCA-203ENST00000578063 FOXN1O15353 648 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 SMC2O95347 1197 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 PLCG1P19174 1290 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 CCND2P30279 289 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 SPIRE1Q08AE8 756 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 HAUS3Q68CZ6 603 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 RASAL3Q86YV0 1011 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 SMC1BQ8NDV3 1235 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 KIF3CO14782 793 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 PEX10O60683 326 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 CYP2C8P10632 490 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 ITGB5P18084 799 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 ERCC3P19447 782 aa20.87■□□□□ 0.93
PRKCA-203ENST00000578063 ZNF157P51786 506 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms