RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TAP1Q03518 808 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 MBTPS1Q14703 1052 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 SEC23AQ15436 765 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 PTGISQ16647 500 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 NFRKBQ6P4R8 1299 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
PRPF8-215ENST00000576958 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 RMDN3Q96TC7 470 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRPF8-215ENST00000576958 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
PRPF8-215ENST00000576958 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
PRPF8-215ENST00000576958 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 ABCB11O95342 1321 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 DOCK5Q9H7D0 1870 aa14.06□□□□□ -0.16
PRPF8-215ENST00000576958 TNFRSF10AO00220 468 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 NBNO60934 754 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
PRPF8-215ENST00000576958 SP2Q02086 613 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 TMEM67Q5HYA8 995 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 FBXO11Q86XK2 927 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 HERC6Q8IVU3 1022 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 MTIF3Q9H2K0 278 aaKnown RBP14.05□□□□□ -0.16
PRPF8-215ENST00000576958 RWDD1Q9H446 243 aaPredicted RBP14.05□□□□□ -0.16
PRPF8-215ENST00000576958 PXMP2Q9NR77 195 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 MAD2L2Q9UI95 211 aa14.05□□□□□ -0.16
PRPF8-215ENST00000576958 LOC102724159A0A0B4J2E5 919 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 NKRFO15226 690 aaKnown RBP eCLIP14.04□□□□□ -0.16
PRPF8-215ENST00000576958 LPXNO60711 386 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 GH1P01241 217 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 NR3C2P08235 984 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 PARP1P09874 1014 aaKnown RBP14.04□□□□□ -0.16
PRPF8-215ENST00000576958 MYCLP12524 364 aaPredicted RBP14.04□□□□□ -0.16
PRPF8-215ENST00000576958 PWP2Q15269 919 aaKnown RBP14.04□□□□□ -0.16
PRPF8-215ENST00000576958 ASPRV1Q53RT3 343 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 ARHGEF16Q5VV41 709 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 FAM117BQ6P1L5 589 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 STOX1Q6ZVD7 989 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 HOMER1Q86YM7 354 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 NSUN6Q8TEA1 469 aaKnown RBP14.04□□□□□ -0.16
PRPF8-215ENST00000576958 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 PIBF1Q8WXW3 757 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 MTUS1Q9ULD2 1270 aa14.04□□□□□ -0.16
PRPF8-215ENST00000576958 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 CYTH3O43739 400 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 PCP11498 1178 aaKnown RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 PSEN2P49810 448 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 HSD17B4P51659 736 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 WDR5P61964 334 aaKnown RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 TRIM71Q2Q1W2 868 aaKnown RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 HSDL1Q3SXM5 330 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 RETREG2Q8NC44 543 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 SYMPKQ92797 1274 aaKnown RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 PIGSQ96S52 555 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 UHRF1Q96T88 793 aaPredicted RBP14.03□□□□□ -0.16
PRPF8-215ENST00000576958 SEZ6LQ9BYH1 1024 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 NOD1Q9Y239 953 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 RAD50Q92878 1312 aa14.03□□□□□ -0.16
PRPF8-215ENST00000576958 KLRF2D3W0D1 207 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 CKBP12277 381 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 BMP1P13497 986 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 GRB10Q13322 594 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 MFSD10Q14728 455 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 STXBP2Q15833 593 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 IFIT1BQ5T764 474 aaKnown RBP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 ZNF618Q5T7W0 954 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 LRRC8DQ7L1W4 858 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 PDCD2LQ9BRP1 358 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 GTF2IRD1Q9UHL9 959 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.17
PRPF8-215ENST00000576958 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 NCOR1O75376 2440 aa14.02□□□□□ -0.17
PRPF8-215ENST00000576958 HAS3O00219 553 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 PFKMP08237 780 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 CYP21A2P08686 494 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 SELPP16109 830 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 MFAP1P55081 439 aaKnown RBP14.01□□□□□ -0.17
PRPF8-215ENST00000576958 ANTXR2P58335 489 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 PTPN11Q06124 597 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-215ENST00000576958 BFSP2Q13515 415 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 PGM5Q15124 567 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-215ENST00000576958 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 KHSRPQ92945 711 aaKnown RBP eCLIP14.01□□□□□ -0.17
PRPF8-215ENST00000576958 SLC9A7Q96T83 725 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 UBAC1Q9BSL1 405 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 MYL10Q9BUA6 226 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms