RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PDHBP11177 359 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 CASTP20810 708 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 ARHGAP1Q07960 439 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 IKBKEQ14164 716 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 USH1GQ495M9 461 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 ZNF618Q5T7W0 954 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 TRAF7Q6Q0C0 670 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 SESTD1Q86VW0 696 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 WNT8BQ93098 351 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 TANC1Q9C0D5 1861 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 GTF2IRD1Q9UHL9 959 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
NPLOC4-220ENST00000576940 PIEZO1Q92508 2521 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 GH1P01241 217 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 GOLGA8HP0CJ92 632 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 ALADP13716 330 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 MRE11P49959 708 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 ZNF543Q08ER8 600 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 MBTPS1Q14703 1052 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 MIER1Q8N108 512 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 C7orf31Q8N865 590 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 DDX41Q9UJV9 622 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-220ENST00000576940 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 WDFY4Q6ZS81 3184 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 B4DLN1 442 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 PARNO95453 639 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 FGAP02671 866 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 PSEN2P49810 448 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 MRPL12P52815 198 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 RBL2Q08999 1139 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 HIC1Q14526 733 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 EP400NLQ6ZTU2 488 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 DBF4BQ8NFT6 615 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 SYTL5Q8TDW5 730 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 ANKS1AQ92625 1134 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
NPLOC4-220ENST00000576940 WDR19Q8NEZ3 1342 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 SORBS3O60504 671 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 LGR5O75473 907 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 PTK7Q13308 1070 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 MFSD10Q14728 455 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 STXBP2Q15833 593 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 DGKDQ16760 1214 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 KIAA0753Q2KHM9 967 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 EPC2Q52LR7 807 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 MYOCDQ8IZQ8 938 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 RGS22Q8NE09 1264 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 FBXL18Q96ME1 805 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
NPLOC4-220ENST00000576940 HAS3O00219 553 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 DCXO43602 365 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 EFCAB14O75071 495 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 ZNF286BP0CG31 522 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 HAND2P61296 217 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 NHLH1Q02575 133 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 ALX1Q15699 326 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 MRPL38Q96DV4 380 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 TTC14Q96N46 770 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 SIP14410 1827 aa11.86□□□□□ -0.51
NPLOC4-220ENST00000576940 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 UPP2O95045 317 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 AMHP03971 560 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 EIF2AK2P19525 551 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 THPOP40225 353 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 GPM6BQ13491 265 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 LAMC2Q13753 1193 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 TCEAL5Q5H9L2 206 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 DHX37Q8IY37 1157 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 IWS1Q96ST2 819 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
NPLOC4-220ENST00000576940 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 H3BNC9 293 aa11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-220ENST00000576940 F2P00734 622 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms