RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 KAT2BQ92831 832 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTNS-209ENST00000574776 PXMP2Q9NR77 195 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 PCDHA11Q9Y5I1 949 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 KIAA1217Q5T5P2 1943 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 TRIP12Q14669 1992 aaPredicted RBP17.7■□□□□ 0.42
CTNS-209ENST00000574776 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 ACTN1P12814 892 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 RFC2P35250 354 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 HSD17B4P51659 736 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 BFSP2Q13515 415 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 PPP2R2DQ66LE6 453 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 GDF6Q6KF10 455 aaPredicted RBP17.7■□□□□ 0.42
CTNS-209ENST00000574776 SYMPKQ92797 1274 aaKnown RBP17.7■□□□□ 0.42
CTNS-209ENST00000574776 MTMR8Q96EF0 704 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
CTNS-209ENST00000574776 TTC28Q96AY4 2481 aa17.7■□□□□ 0.42
CTNS-209ENST00000574776 BAZ2BQ9UIF8 2168 aaKnown RBP17.69■□□□□ 0.42
CTNS-209ENST00000574776 IFIT3O14879 490 aaKnown RBP17.69■□□□□ 0.42
CTNS-209ENST00000574776 ZBTB5O15062 677 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 CYP21A2P08686 494 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
CTNS-209ENST00000574776 CHMLP26374 656 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
CTNS-209ENST00000574776 DGKDQ16760 1214 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 SENP2Q9HC62 589 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
CTNS-209ENST00000574776 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 LAMC2Q13753 1193 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 SLC35G1Q2M3R5 365 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 SESTD1Q86VW0 696 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 HOMER1Q86YM7 354 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
CTNS-209ENST00000574776 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 PIGSQ96S52 555 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 PDCD2LQ9BRP1 358 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 ALG1Q9BT22 464 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 MAP3K20Q9NYL2 800 aaKnown RBP17.68■□□□□ 0.42
CTNS-209ENST00000574776 TAF6LQ9Y6J9 622 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 TET1Q8NFU7 2136 aa17.68■□□□□ 0.42
CTNS-209ENST00000574776 SORBS3O60504 671 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 RGS20O76081 388 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 PSEN2P49810 448 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
CTNS-209ENST00000574776 GHRHRQ02643 423 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 GRM4Q14833 912 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 TJAP1Q5JTD0 557 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 VSIG10LQ86VR7 867 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 EMID1Q96A84 441 aaPredicted RBP17.67■□□□□ 0.42
CTNS-209ENST00000574776 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
CTNS-209ENST00000574776 RIOX1Q9H6W3 641 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
CTNS-209ENST00000574776 SPTBN5Q9NRC6 3674 aaKnown RBP17.67■□□□□ 0.42
CTNS-209ENST00000574776 CHD7Q9P2D1 2997 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 ERICH2A1L162 156 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 E7EWF7 191 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 CA3P07451 260 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 GPNMBQ14956 572 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 PGM5Q15124 567 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 CCDC155Q8N6L0 562 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 C7orf31Q8N865 590 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 PHOSPHO2Q8TCD6 241 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 CERS4Q9HA82 394 aa17.66■□□□□ 0.42
CTNS-209ENST00000574776 GCOM1H8Y6P7 765 aaPredicted RBP17.65■□□□□ 0.42
CTNS-209ENST00000574776 RFXAPO00287 272 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 CYTH3O43739 400 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 POLR2MP0CAP2 368 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 ZNF286BP0CG31 522 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 SP2Q02086 613 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 MFSD10Q14728 455 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 WTAPQ15007 396 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 KIAA0753Q2KHM9 967 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
CTNS-209ENST00000574776 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 SAMD3Q8N6K7 520 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 PPTC7Q8NI37 304 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 ATXN2LQ8WWM7 1075 aaKnown RBP17.65■□□□□ 0.42
CTNS-209ENST00000574776 DHX38Q92620 1227 aaKnown RBP17.65■□□□□ 0.42
CTNS-209ENST00000574776 SLC9A7Q96T83 725 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 GTF2IRD1Q9UHL9 959 aa17.65■□□□□ 0.42
CTNS-209ENST00000574776 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 HAS3O00219 553 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 SGSM2O43147 1006 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 PPFIA4O75335 1185 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 SELPP16109 830 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 ZNF200P98182 395 aaPredicted RBP17.64■□□□□ 0.41
CTNS-209ENST00000574776 TROAPQ12815 778 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 TRAF1Q13077 416 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 CELF3Q5SZQ8 465 aaKnown RBP17.64■□□□□ 0.41
CTNS-209ENST00000574776 KCNV1Q6PIU1 500 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms