RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZSCAN29Q8IWY8 852 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 RASGRP4Q8TDF6 673 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ESR2Q92731 530 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 THOC1Q96FV9 657 aaKnown RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 RNF41Q9H4P4 317 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 NOD2Q9HC29 1040 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 NOVA2Q9UNW9 492 aaKnown RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 H0YGN5 161 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ATP6V1G2O95670 118 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ERVK-9P63128 1117 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 PPP1R7Q15435 360 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 TDRD12Q587J7 1177 aaKnown RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 FAM114A1Q8IWE2 563 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 SRBD1Q8N5C6 995 aaKnown RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 CCT6BQ92526 530 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 STAMBPL1Q96FJ0 436 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 ZSCAN10Q96SZ4 725 aaPredicted RBP15.89■□□□□ 0.13
SMG6-215ENST00000574501 SIK3Q9Y2K2 1263 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 NFS1Q9Y697 457 aa15.89■□□□□ 0.13
SMG6-215ENST00000574501 CYP2D7A0A087X1C5 515 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 PJA2O43164 708 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 UQCRFS1P1P0C7P4 283 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 UBA7P41226 1012 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 PPP2R2AP63151 447 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 TAF1DQ9H5J8 278 aaPredicted RBP15.88■□□□□ 0.13
SMG6-215ENST00000574501 BICDL2A1A5D9 508 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 IFFO1Q0D2I5 559 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 VWA3BQ502W6 1294 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
SMG6-215ENST00000574501 GKAP1Q5VSY0 366 aaPredicted RBP15.88■□□□□ 0.13
SMG6-215ENST00000574501 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 TOM1L2Q6ZVM7 507 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 CCDC155Q8N6L0 562 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 UBLCP1Q8WVY7 318 aaPredicted RBP15.88■□□□□ 0.13
SMG6-215ENST00000574501 TATDN2Q93075 761 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 LRRC4CQ9HCJ2 640 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
SMG6-215ENST00000574501 BUB1BO60566 1050 aaPredicted RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 ECHS1P30084 290 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 FLT3P36888 993 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 MAGOHP61326 146 aaKnown RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 TROAPQ12815 778 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 PPP2R5BQ15173 497 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 PTPROQ16827 1216 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 MDM1Q8TC05 714 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 MAGOHBQ96A72 148 aaKnown RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 RSRC1Q96IZ7 334 aaKnown RBP15.87■□□□□ 0.13
SMG6-215ENST00000574501 NEUROG2Q9H2A3 272 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 RNF14Q9UBS8 474 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 TSKSQ9UJT2 592 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 GLI3P10071 1580 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 CDC25CP30307 473 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 TRAPPC10P48553 1259 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 HLFQ16534 295 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 LRIG3Q6UXM1 1119 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 NSMCE1Q8WV22 266 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMG6-215ENST00000574501 L3MBTL1Q9Y468 752 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
SMG6-215ENST00000574501 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 C5orf60A6NFR6 353 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 CLTAP09496 248 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 PDE6BP35913 854 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 ASIC1P78348 528 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 ASTE1Q2TB18 679 aaPredicted RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 PROSER2Q86WR7 435 aaPredicted RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 RNF10Q8N5U6 811 aaKnown RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 C3orf20Q8ND61 904 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 CUL5Q93034 780 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 ISCUQ9H1K1 167 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 NLRC4Q9NPP4 1024 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 RBM28Q9NW13 759 aaKnown RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 DNAJC8O75937 253 aaPredicted RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 SCG2P13521 617 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 GNAT2P19087 354 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 BRD2P25440 801 aaKnown RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 KLRC1P26715 233 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 PNMA8AQ86V59 439 aaPredicted RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 BAP1Q92560 729 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 INPP4AQ96PE3 977 aaPredicted RBP15.86■□□□□ 0.13
SMG6-215ENST00000574501 SLC39A2Q9NP94 309 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
SMG6-215ENST00000574501 F8W031 263 aaPredicted RBP15.85■□□□□ 0.13
SMG6-215ENST00000574501 PPIP5K2O43314 1243 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 NMT2O60551 498 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 CLSTN1O94985 981 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 DRD4P21917 467 aa15.85■□□□□ 0.13
SMG6-215ENST00000574501 GCKP35557 465 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms