RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GPT2Q8TD30 523 aa27.25■■□□□ 1.95
ATPAF1-213ENST00000574428 UIMC1Q96RL1 719 aa27.25■■□□□ 1.95
ATPAF1-213ENST00000574428 IGLV3-22A0A075B6J6 115 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 VWA3AA6NCI4 1184 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 SOWAHBA6NEL2 793 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 CUTAO60888 179 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 MAPK4P31152 587 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 MRPS9P82933 396 aaKnown RBP27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 Q4G0T1 1027 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 ARL6IP4Q66PJ3 421 aaKnown RBP27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 ADALQ6DHV7 355 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 GPR142Q7Z601 462 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 FERMT2Q96AC1 680 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 MTMR9Q96QG7 549 aa27.24■■□□□ 1.95
ATPAF1-213ENST00000574428 DNAJC25-GNG10A0A024R161 153 aa27.23■■□□□ 1.95
ATPAF1-213ENST00000574428 CEP55Q53EZ4 464 aa27.23■■□□□ 1.95
ATPAF1-213ENST00000574428 DNERQ8NFT8 737 aa27.23■■□□□ 1.95
ATPAF1-213ENST00000574428 GJA10Q969M2 543 aa27.23■■□□□ 1.95
ATPAF1-213ENST00000574428 IVNS1ABPQ9Y6Y0 642 aa27.23■■□□□ 1.95
ATPAF1-213ENST00000574428 NR3C2P08235 984 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 MAP2K2P36507 400 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 SPECC1Q5M775 1068 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 CSRNP2Q9H175 543 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 ITGB5P18084 799 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 ADORA2AP29274 412 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 CCND2P30279 289 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 PRPHP41219 470 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 ALDH5A1P51649 535 aaPredicted RBP27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 DTHD1Q6ZMT9 781 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 PLEKHH3Q7Z736 793 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 HAS1Q92839 578 aa27.22■■□□□ 1.95
ATPAF1-213ENST00000574428 A0A1W2PQ27 194 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 A0A1W2PQ64 194 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 A0A1W2PQD8 194 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 TXKP42681 527 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 SHC4Q6S5L8 630 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 VSIG10LQ86VR7 867 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 PLA2G4DQ86XP0 818 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 FGD4Q96M96 766 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 MXRA8Q9BRK3 442 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 KCNMB3Q9NPA1 279 aa27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 ADD3Q9UEY8 706 aaKnown RBP27.21■■□□□ 1.95
ATPAF1-213ENST00000574428 STRNO43815 780 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 ABRAQ8N0Z2 381 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 FSIP1Q8NA03 581 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 ETNPPLQ8TBG4 499 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 GOLPH3LQ9H4A5 285 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 UBIAD1Q9Y5Z9 338 aa27.2■■□□□ 1.95
ATPAF1-213ENST00000574428 THSD7BQ9C0I4 1608 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 MEIS1O00470 390 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 MSH4O15457 936 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 TRAK2O60296 914 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 MARCH6O60337 910 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 XRRA1Q6P2D8 792 aa27.2■■□□□ 1.94
ATPAF1-213ENST00000574428 ZNFX1Q9P2E3 1918 aaKnown RBP27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 TBC1D8O95759 1140 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 MBD3O95983 291 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 LIG1P18858 919 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 GRB14Q14449 540 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 ZNF579Q8NAF0 562 aaKnown RBP27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 MRPS27Q92552 414 aaKnown RBP27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 IWS1Q96ST2 819 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 WDR11Q9BZH6 1224 aa27.19■■□□□ 1.94
ATPAF1-213ENST00000574428 A0A1B0GVL5 298 aa27.18■■□□□ 1.94
ATPAF1-213ENST00000574428 COBLO75128 1261 aa27.18■■□□□ 1.94
ATPAF1-213ENST00000574428 ARP10275 920 aa27.18■■□□□ 1.94
ATPAF1-213ENST00000574428 CMA1P23946 247 aa27.18■■□□□ 1.94
ATPAF1-213ENST00000574428 RESP18Q5W5W9 173 aa27.18■■□□□ 1.94
ATPAF1-213ENST00000574428 TECP42680 631 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 SETQ01105 290 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 USP49Q70CQ1 688 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 TTC12Q9H892 705 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 JADE2Q9NQC1 790 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 TRPA1O75762 1119 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 NIPA1Q7RTP0 329 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 RNF186Q9NXI6 227 aa27.17■■□□□ 1.94
ATPAF1-213ENST00000574428 TBX3O15119 743 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 EDNRBP24530 442 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 MTMR1Q13613 665 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 GSE1Q14687 1217 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 KLHL40Q2TBA0 621 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 ZNF792Q3KQV3 632 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 SLFN12Q8IYM2 578 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 KCNH7Q9NS40 1196 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 LRRC37A2A6NM11 1700 aa27.16■■□□□ 1.94
ATPAF1-213ENST00000574428 ZNF236Q9UL36 1845 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 SLC15A5A6NIM6 579 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 PFKFB1P16118 471 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 DEKP35659 375 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 LONP1P36776 959 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 NDUFA8P51970 172 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 PDE4DQ08499 809 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 STXBP2Q15833 593 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 TMEM266Q2M3C6 531 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 SKOR2Q2VWA4 1001 aaPredicted RBP27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 CCDC73Q6ZRK6 1079 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 SYMPKQ92797 1274 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 EPSTI1Q96J88 318 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 FAM20AQ96MK3 541 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 PKD2L1Q9P0L9 805 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms