RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	APOA5	Q6Q788	366 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	CMTR1	Q8N1G2	835 aa	Known RBP	13.78	□□□□□ -0.2
ABR-222	ENST00000573667	CCDC82	Q8N4S0	544 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	SLC43A3	Q8NBI5	491 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	LRCH3	Q96II8	777 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.78	□□□□□ -0.2
ABR-222	ENST00000573667	TANC1	Q9C0D5	1861 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	KAT6A	Q92794	2004 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667		A6NJR5	290 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	CD4	P01730	458 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	ITGB8	P26012	769 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	SHH	Q15465	462 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	RTN1	Q16799	776 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	FAM47C	Q5HY64	1035 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	BLOC1S2	Q6QNY1	142 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	TMTC3	Q6ZXV5	915 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	TMEM199	Q8N511	208 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	JAKMIP1	Q96N16	626 aa	Known RBP	13.77	□□□□□ -0.21
ABR-222	ENST00000573667	PPP1R12C	Q9BZL4	782 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	DDX41	Q9UJV9	622 aa	Known RBP	13.77	□□□□□ -0.21
ABR-222	ENST00000573667	TBX21	Q9UL17	535 aa		13.77	□□□□□ -0.21
ABR-222	ENST00000573667	RANBP2	P49792	3224 aa	Known RBP	13.77	□□□□□ -0.21
ABR-222	ENST00000573667	SCN5A	Q14524	2016 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GBF1	Q92538	1859 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GRIN2D	O15399	1336 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	KLF18	A0A0U1RQI7	1052 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GOLGA8A	A7E2F4	631 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GOLGA8B	A8MQT2	603 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	STAM2	O75886	525 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	MMP3	P08254	477 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	SUPT20HL2	P0C7V6	817 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	CAST	P20810	708 aa	Known RBP	13.76	□□□□□ -0.21
ABR-222	ENST00000573667	PSMA5	P28066	241 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	CHMP4BP1	P59074	171 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	PPIG	Q13427	754 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
ABR-222	ENST00000573667	LAMC2	Q13753	1193 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GNPTAB	Q3T906	1256 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	MFSD5	Q6N075	450 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	GPR153	Q6NV75	609 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	VSIG10L	Q86VR7	867 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	DHX37	Q8IY37	1157 aa	Known RBP	13.76	□□□□□ -0.21
ABR-222	ENST00000573667	AFG1L	Q8WV93	481 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	SNX14	Q9Y5W7	946 aa		13.76	□□□□□ -0.21
ABR-222	ENST00000573667	PIK3CD	O00329	1044 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	EPB41L2	O43491	1005 aa	Known RBP	13.75	□□□□□ -0.21
ABR-222	ENST00000573667	B4GALT4	O60513	344 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	TGFB3	P10600	412 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	ARHGAP1	Q07960	439 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	DGKD	Q16760	1214 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	C9orf50	Q5SZB4	431 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	USP17L6P	Q6QN14	398 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667		Q6ZUG5	572 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	HEATR3	Q7Z4Q2	680 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	KCNB2	Q92953	911 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	RNPC3	Q96LT9	517 aa	Known RBP	13.75	□□□□□ -0.21
ABR-222	ENST00000573667	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-222	ENST00000573667	HIPK3	Q9H422	1215 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	PSTPIP2	Q9H939	334 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	BRPF3	Q9ULD4	1205 aa		13.75	□□□□□ -0.21
ABR-222	ENST00000573667	FRMPD4	Q14CM0	1322 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	CNTNAP5	Q8WYK1	1306 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	CCDC196	A0A1B0GTZ2	297 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	hCG_1642624	A0A1W2PR95	340 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	SPDYE3	A6NKU9	549 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	METAP2	P50579	478 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
ABR-222	ENST00000573667	RCAN1	P53805	252 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	PTPN11	Q06124	597 aa	Predicted RBP	13.74	□□□□□ -0.21
ABR-222	ENST00000573667	NBPF20	Q3BBV1	942 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	NFRKB	Q6P4R8	1299 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	IL31RA	Q8NI17	732 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	PPTC7	Q8NI37	304 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	EMID1	Q96A84	441 aa	Predicted RBP	13.74	□□□□□ -0.21
ABR-222	ENST00000573667	ZFP91	Q96JP5	570 aa	Predicted RBP	13.74	□□□□□ -0.21
ABR-222	ENST00000573667	KATNAL1	Q9BW62	490 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	TRPV6	Q9H1D0	765 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	MLXIP	Q9HAP2	919 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	NOD1	Q9Y239	953 aa		13.74	□□□□□ -0.21
ABR-222	ENST00000573667	MEIS2	O14770	477 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	RGS20	O76081	388 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	GGPS1	O95749	300 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	CPA1	P15085	419 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	CSF2RA	P15509	400 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	RPS6KB1	P23443	525 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	CYP2C18	P33260	490 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	XRRA1	Q6P2D8	792 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.73	□□□□□ -0.21
ABR-222	ENST00000573667	BRF1	Q92994	677 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	SPATA33	Q96N06	139 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	EHMT1	Q9H9B1	1298 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	TRMT13	Q9NUP7	481 aa	Known RBP	13.73	□□□□□ -0.21
ABR-222	ENST00000573667	RTEL1	Q9NZ71	1219 aa		13.73	□□□□□ -0.21
ABR-222	ENST00000573667	hCG_1984214	I3L0E3	225 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	FIBP	O43427	364 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	SORBS3	O60504	671 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	UBA1	P22314	1058 aa	Known RBP	13.72	□□□□□ -0.21
ABR-222	ENST00000573667	EPHB4	P54760	987 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	NAPA	P54920	295 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	MRPS9	P82933	396 aa	Known RBP	13.72	□□□□□ -0.21
ABR-222	ENST00000573667	APOBR	Q0VD83	1088 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	NEDD9	Q14511	834 aa		13.72	□□□□□ -0.21

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