RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	TTYH1	Q9H313	450 aa	Predicted RBP	19.41	■□□□□ 0.7
RPS15A-209	ENST00000573554	SEMA6B	Q9H3T3	888 aa		19.41	■□□□□ 0.7
RPS15A-209	ENST00000573554	GCOM1	H8Y6P7	765 aa	Predicted RBP	19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	PLEKHA8P1	O95397	391 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	MMP3	P08254	477 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	POLR2M	P0CAP2	368 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	MYCL	P12524	364 aa	Predicted RBP	19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	RXRA	P19793	462 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	LIFR	P42702	1097 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	FCHSD1	Q86WN1	690 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	SRBD1	Q8N5C6	995 aa	Known RBP	19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	CTCFL	Q8NI51	663 aa	Predicted RBP	19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	ZFP91	Q96JP5	570 aa	Predicted RBP	19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	SPZ1	Q9BXG8	430 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	LRRC2	Q9BYS8	371 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	IL23A	Q9NPF7	189 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	MYH7B	A7E2Y1	1941 aa		19.4	■□□□□ 0.7
RPS15A-209	ENST00000573554	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	SUPT20HL2	P0C7V6	817 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	SMARCA1	P28370	1054 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	KIF5B	P33176	963 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	FAM47C	Q5HY64	1035 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	NFRKB	Q6P4R8	1299 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	NFXL1	Q6ZNB6	911 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	CMTR1	Q8N1G2	835 aa	Known RBP	19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	KAT2B	Q92831	832 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	MRVI1	Q9Y6F6	885 aa		19.39	■□□□□ 0.69
RPS15A-209	ENST00000573554	CCDC69	A6NI79	296 aa		19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	RAB11FIP4	Q86YS3	637 aa		19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	RASEF	Q8IZ41	740 aa		19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	EMID1	Q96A84	441 aa	Predicted RBP	19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	RRP36	Q96EU6	259 aa	Known RBP	19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	SCLY	Q96I15	445 aa		19.38	■□□□□ 0.69
RPS15A-209	ENST00000573554	GRXCR1	A8MXD5	290 aa		19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	CHMP4BP1	P59074	171 aa		19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	SP2	Q02086	613 aa		19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	PTPN11	Q06124	597 aa	Predicted RBP	19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	PSRC1	Q6PGN9	363 aa	Predicted RBP	19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	HERVK_113	Q902F9	699 aa		19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	19.37	■□□□□ 0.69	1e-15	■■□□□ 12.1
RPS15A-209	ENST00000573554	CDX2	Q99626	313 aa	Predicted RBP	19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	LZTS2	Q9BRK4	669 aa		19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	CXXC1	Q9P0U4	656 aa	Predicted RBP	19.37	■□□□□ 0.69
RPS15A-209	ENST00000573554	FRMPD4	Q14CM0	1322 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	CDC45	O75419	566 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	FGB	P02675	491 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	CAST	P20810	708 aa	Known RBP	19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	GNAQ	P50148	359 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	MRPS9	P82933	396 aa	Known RBP	19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	EXOSC10	Q01780	885 aa	Known RBP	19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	LAMC2	Q13753	1193 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	ADCK5	Q3MIX3	580 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	MYSM1	Q5VVJ2	828 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	SGMS1	Q86VZ5	419 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	DHX37	Q8IY37	1157 aa	Known RBP	19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	NEK1	Q96PY6	1258 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	CTAGE1	Q96RT6	745 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	SLC12A7	Q9Y666	1083 aa		19.36	■□□□□ 0.69
RPS15A-209	ENST00000573554	MEIS2	O14770	477 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	SORBS3	O60504	671 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CALM1	P0DP23	149 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CALM2	P0DP24	149 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CALM3	P0DP25	149 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	DNAJB2	P25686	324 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CCND2	P30279	289 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	PBX2	P40425	430 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	DGKD	Q16760	1214 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	HSDL1	Q3SXM5	330 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	TSGA10IP	Q3SY00	556 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CELF3	Q5SZQ8	465 aa	Known RBP	19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	RNF20	Q5VTR2	975 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	USP17L6P	Q6QN14	398 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	OTOP2	Q7RTS6	562 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	FANCB	Q8NB91	859 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	SLC17A8	Q8NDX2	589 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	PPTC7	Q8NI37	304 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	CCDC136	Q96JN2	1154 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	TCEANC2	Q96MN5	208 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	BCAS3	Q9H6U6	928 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	SCN5A	Q14524	2016 aa		19.35	■□□□□ 0.69
RPS15A-209	ENST00000573554	hCG_1642624	A0A1W2PR95	340 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	TGFB3	P10600	412 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	GDF6	Q6KF10	455 aa	Predicted RBP	19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	KCNV1	Q6PIU1	500 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	SESTD1	Q86VW0	696 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	CCDC82	Q8N4S0	544 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	PBX4	Q9BYU1	374 aa		19.34	■□□□□ 0.69
RPS15A-209	ENST00000573554	HAS3	O00219	553 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	PIK3CD	O00329	1044 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	GGPS1	O95749	300 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	ZNF286B	P0CG31	522 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	HOXD8	P13378	290 aa	Predicted RBP	19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	UBA1	P22314	1058 aa	Known RBP	19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	PTGIS	Q16647	500 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	TMTC3	Q6ZXV5	915 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	DHX32	Q7L7V1	743 aa	Known RBP	19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	RPUSD2	Q8IZ73	545 aa	Known RBP	19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	MYLIP	Q8WY64	445 aa		19.33	■□□□□ 0.68
RPS15A-209	ENST00000573554	HDAC6	Q9UBN7	1215 aa		19.33	■□□□□ 0.68

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