RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KIAA1024Q9UPX6 916 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 MRPL11Q9Y3B7 192 aaKnown RBP15.61■□□□□ 0.09
TVP23A-207ENST00000573360 FAM86B1E9PN63 330 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 IRF6O14896 467 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 TBC1D12O60347 775 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 FAM86B2P0C5J1 330 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 DISC1Q9NRI5 854 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 LAMB1P07942 1786 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 POTECB2RU33 542 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 SMARCA1P28370 1054 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 LONP1P36776 959 aaKnown RBP15.61■□□□□ 0.09
TVP23A-207ENST00000573360 UBASH3AP57075 661 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 CCAR2Q8N163 923 aaKnown RBP15.61■□□□□ 0.09
TVP23A-207ENST00000573360 C4orf32Q8N8J7 132 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 DAGLBQ8NCG7 672 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 RRAGCQ9HB90 399 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 CGNQ9P2M7 1197 aaKnown RBP15.61■□□□□ 0.09
TVP23A-207ENST00000573360 CTNND2Q9UQB3 1225 aa15.61■□□□□ 0.09
TVP23A-207ENST00000573360 USP2O75604 605 aaPredicted RBP15.6■□□□□ 0.09
TVP23A-207ENST00000573360 TRERF1Q96PN7 1200 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 RGL1Q9NZL6 768 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 SMCHD1A6NHR9 2005 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 ECM29Q5VYK3 1845 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 E9PMD0 336 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 SARM1Q6SZW1 724 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.6■□□□□ 0.09
TVP23A-207ENST00000573360 TPH2Q8IWU9 490 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 NOC3LQ8WTT2 800 aaKnown RBP15.6■□□□□ 0.09
TVP23A-207ENST00000573360 CDK5RAP2Q96SN8 1893 aa15.6■□□□□ 0.09
TVP23A-207ENST00000573360 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 BMP6P22004 513 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 CDC25BP30305 580 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 IRX3P78415 501 aaPredicted RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 FANCCQ00597 558 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 PABPC4Q13310 644 aaKnown RBP eCLIP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 FAM160B2Q86V87 743 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 NCAPG2Q86XI2 1143 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 GPIHBP1Q8IV16 184 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 PGAP2Q9UHJ9 254 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 DNAI1Q9UI46 699 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 NFE2L3Q9Y4A8 694 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 WDR46O15213 610 aaKnown RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 MAP3K9P80192 1104 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 PIGOQ8TEQ8 1089 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 OPLAHO14841 1288 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 RPS6P62753 249 aaKnown RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 BAATQ14032 418 aaPredicted RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 LRRC41Q15345 812 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 TREML2Q5T2D2 321 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 PAXIP1Q6ZW49 1069 aaPredicted RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
TVP23A-207ENST00000573360 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
TVP23A-207ENST00000573360 ESYT2A0FGR8 921 aa15.58■□□□□ 0.09
TVP23A-207ENST00000573360 CCZ1BP86790 482 aa15.58■□□□□ 0.09
TVP23A-207ENST00000573360 CCZ1P86791 482 aaPredicted RBP15.58■□□□□ 0.09
TVP23A-207ENST00000573360 CTTNQ14247 550 aaKnown RBP15.58■□□□□ 0.09
TVP23A-207ENST00000573360 ARL6IP4Q66PJ3 421 aaKnown RBP15.58■□□□□ 0.09
TVP23A-207ENST00000573360 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.09
TVP23A-207ENST00000573360 hCG_1984214I3L0E3 225 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 CTIFO43310 598 aaKnown RBP15.58■□□□□ 0.08
TVP23A-207ENST00000573360 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.08
TVP23A-207ENST00000573360 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
TVP23A-207ENST00000573360 PDE4DQ08499 809 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 ZNF713Q8N859 430 aaPredicted RBP15.58■□□□□ 0.08
TVP23A-207ENST00000573360 MNS1Q8NEH6 495 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 IL31RAQ8NI17 732 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 CPLX3Q8WVH0 158 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 TAAR1Q96RJ0 339 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 SAMSN1Q9NSI8 373 aaKnown RBP15.58■□□□□ 0.08
TVP23A-207ENST00000573360 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 USP14P54578 494 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 KCNK18Q7Z418 384 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 ANKRD7Q92527 254 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 MTRQ99707 1265 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 MYH8P13535 1937 aa15.58■□□□□ 0.08
TVP23A-207ENST00000573360 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
TVP23A-207ENST00000573360 CHMP4BP1P59074 171 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 HAS1Q92839 578 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 RMDN3Q96TC7 470 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 SFI1A8K8P3 1242 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 ARHGEF16Q5VV41 709 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 ANKRD35Q8N283 1001 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 ZBTB9Q96C00 473 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 TRIM49BA6NDI0 452 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 ZBTB39O15060 712 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 GAS7O60861 476 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 ZSCAN20P17040 1043 aaPredicted RBP15.57■□□□□ 0.08
TVP23A-207ENST00000573360 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 LRRC15Q8TF66 581 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 TIGD1Q96MW7 591 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 PPP1R9AQ9ULJ8 1098 aa15.57■□□□□ 0.08
TVP23A-207ENST00000573360 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms