RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 VPS18Q9P253 973 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 PHACTR2O75167 634 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 PDIA5Q14554 519 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 FIGNQ5HY92 759 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 GUF1Q8N442 669 aaKnown RBP12.47□□□□□ -0.41
RPAIN-212ENST00000573126 CAGE1Q8TC20 777 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 HAS1Q92839 578 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
RPAIN-212ENST00000573126 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 DEF6Q9H4E7 631 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 CAPN6Q9Y6Q1 641 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 PLIN4Q96Q06 1357 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 LRRIQ3A6PVS8 624 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-212ENST00000573126 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-212ENST00000573126 VAV2P52735 878 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 MAN2A1Q16706 1144 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 LRRC55Q6ZSA7 311 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC102AQ96A19 550 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 GDAP1L1Q96MZ0 367 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 LRRC53A6NM62 1247 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 PPEF1O14829 653 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-212ENST00000573126 SHMT1P34896 483 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 KIF11P52732 1056 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 USP14P54578 494 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 CACNB1Q02641 598 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-212ENST00000573126 RAD51AP2Q09MP3 1159 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 GPS2Q13227 327 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 CUL5Q93034 780 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
RPAIN-212ENST00000573126 USP17L15C9J2P7 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L11C9JVI0 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L18D6R9N7 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L22D6RA61 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L19D6RCP7 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L20D6RJB6 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 EIF4A3P38919 411 aaKnown RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 LMAN1P49257 510 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 HNRNPH2P55795 449 aaKnown RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 LRRC63Q05C16 580 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L24Q0WX57 530 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 NFIAQ12857 509 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 SHROOM1Q2M3G4 852 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 WDR93Q6P2C0 686 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.42
RPAIN-212ENST00000573126 PSMB7Q99436 277 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 FGFBP2Q9BYJ0 223 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 GBP3Q9H0R5 595 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 KANSL2Q9H9L4 492 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.42
RPAIN-212ENST00000573126 AKR1B10O60218 316 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 EIF3JO75822 258 aaKnown RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 CDK17Q00537 523 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 COASYQ13057 564 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 GSPT2Q8IYD1 628 aaKnown RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 FAN1Q9Y2M0 1017 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 ZBTB5O15062 677 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 MOCS3O95396 460 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 CACNB3P54284 484 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 EHHADHQ08426 723 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 C2orf54Q08AI8 447 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 NELFCDQ8IXH7 590 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 DNAJC19Q96DA6 116 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 ZC3H12CQ9C0D7 883 aaKnown RBP12.45□□□□□ -0.42
RPAIN-212ENST00000573126 NLRC4Q9NPP4 1024 aa12.45□□□□□ -0.42
RPAIN-212ENST00000573126 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
RPAIN-212ENST00000573126 E9PMD0 336 aa12.44□□□□□ -0.42
RPAIN-212ENST00000573126 TRAF5O00463 557 aa12.44□□□□□ -0.42
RPAIN-212ENST00000573126 HNRNPH3P31942 346 aaKnown RBP12.44□□□□□ -0.42
RPAIN-212ENST00000573126 TNNT3P45378 269 aaPredicted RBP12.44□□□□□ -0.42
RPAIN-212ENST00000573126 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
RPAIN-212ENST00000573126 CDC42EP5Q6NZY7 148 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms