RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 FAM126BQ8IXS8 530 aa18.63■□□□□ 0.57
NDE1-205ENST00000572756 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
NDE1-205ENST00000572756 NID2Q14112 1375 aa18.63■□□□□ 0.57
NDE1-205ENST00000572756 SZT2Q5T011 3432 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 GOLGA8BA8MQT2 603 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 DCDC2CA8MYV0 355 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
NDE1-205ENST00000572756 ITGB8P26012 769 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 PSMA5P28066 241 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 CDC27P30260 824 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 PURAQ00577 322 aaKnown RBP18.62■□□□□ 0.57
NDE1-205ENST00000572756 APOBRQ0VD83 1088 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 BRF1Q92994 677 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 LBHD1Q9BQE6 289 aaPredicted RBP18.62■□□□□ 0.57
NDE1-205ENST00000572756 UBE2OQ9C0C9 1292 aaKnown RBP18.62■□□□□ 0.57
NDE1-205ENST00000572756 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
NDE1-205ENST00000572756 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
NDE1-205ENST00000572756 CD4P01730 458 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
NDE1-205ENST00000572756 CCND2P30279 289 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 ARHGAP1Q07960 439 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 ITGA7Q13683 1181 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 BADQ92934 168 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 SEZ6LQ9BYH1 1024 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 ZSWIM6Q9HCJ5 1215 aa18.61■□□□□ 0.57
NDE1-205ENST00000572756 GH1P01241 217 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 EVCP57679 992 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 PSMC6P62333 389 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 FGD1P98174 961 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 TDHQ8IZJ6 230 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 EMID1Q96A84 441 aaPredicted RBP18.6■□□□□ 0.57
NDE1-205ENST00000572756 TM6SF1Q9BZW5 370 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 TMEM39AQ9NV64 488 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 MRVI1Q9Y6F6 885 aa18.6■□□□□ 0.57
NDE1-205ENST00000572756 KPNA6O60684 536 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
NDE1-205ENST00000572756 METAP2P50579 478 aaKnown RBP eCLIP18.59■□□□□ 0.57
NDE1-205ENST00000572756 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
NDE1-205ENST00000572756 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
NDE1-205ENST00000572756 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 AFG1LQ8WV93 481 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
NDE1-205ENST00000572756 CUL5Q93034 780 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 MTG1Q9BT17 334 aaPredicted RBP18.59■□□□□ 0.57
NDE1-205ENST00000572756 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
NDE1-205ENST00000572756 MMP3P08254 477 aa18.58■□□□□ 0.56
NDE1-205ENST00000572756 MYL3P08590 195 aa18.58■□□□□ 0.56
NDE1-205ENST00000572756 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.56
NDE1-205ENST00000572756 KCNV1Q6PIU1 500 aa18.58■□□□□ 0.56
NDE1-205ENST00000572756 ZFP91Q96JP5 570 aaPredicted RBP18.58■□□□□ 0.56
NDE1-205ENST00000572756 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.56
NDE1-205ENST00000572756 V9GY48 417 aaPredicted RBP18.58■□□□□ 0.56
NDE1-205ENST00000572756 DOCK5Q9H7D0 1870 aa18.58■□□□□ 0.56
NDE1-205ENST00000572756 CCDC196A0A1B0GTZ2 297 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 SOX1O00570 391 aaPredicted RBP18.57■□□□□ 0.56
NDE1-205ENST00000572756 TLR3O15455 904 aaKnown RBP18.57■□□□□ 0.56
NDE1-205ENST00000572756 STAM2O75886 525 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 TIMP1P01033 207 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 TGFB3P10600 412 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 RAG1P15918 1043 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 SP2Q02086 613 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 LRIT3Q3SXY7 679 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 PCNX4Q63HM2 1172 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
NDE1-205ENST00000572756 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
NDE1-205ENST00000572756 LAMA2P24043 3122 aaKnown RBP18.57■□□□□ 0.56
NDE1-205ENST00000572756 hCG_1984214I3L0E3 225 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 STXBP3O00186 592 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 B4GALT4O60513 344 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
NDE1-205ENST00000572756 UBA1P22314 1058 aaKnown RBP18.56■□□□□ 0.56
NDE1-205ENST00000572756 ICAM3P32942 547 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 LAMC2Q13753 1193 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 UBE2SQ16763 222 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 CELF3Q5SZQ8 465 aaKnown RBP18.56■□□□□ 0.56
NDE1-205ENST00000572756 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 ZNF713Q8N859 430 aaPredicted RBP18.56■□□□□ 0.56
NDE1-205ENST00000572756 PPTC7Q8NI37 304 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
NDE1-205ENST00000572756 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 CYP46A1Q9Y6A2 500 aa18.56■□□□□ 0.56
NDE1-205ENST00000572756 PDIA3P30101 505 aaKnown RBP18.55■□□□□ 0.56
NDE1-205ENST00000572756 NTRK3Q16288 839 aa18.55■□□□□ 0.56
NDE1-205ENST00000572756 NBPF20Q3BBV1 942 aa18.55■□□□□ 0.56
NDE1-205ENST00000572756 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
NDE1-205ENST00000572756 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
NDE1-205ENST00000572756 KAT2BQ92831 832 aa18.55■□□□□ 0.56
NDE1-205ENST00000572756 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
NDE1-205ENST00000572756 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms