RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 CPT1AP50416 773 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 ITGA7Q13683 1181 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 USP17L6PQ6QN14 398 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 SAMD3Q8N6K7 520 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.28
LITAF-208ENST00000571627 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 MROH7Q68CQ1 1323 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
LITAF-208ENST00000571627 KIAA0355O15063 1070 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 EIF3JO75822 258 aaKnown RBP16.78■□□□□ 0.28
LITAF-208ENST00000571627 CABYRO75952 493 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 RGS20O76081 388 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 RPS6KB1P23443 525 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 CDC27P30260 824 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 PURAQ00577 322 aaKnown RBP16.78■□□□□ 0.28
LITAF-208ENST00000571627 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 FAM126BQ8IXS8 530 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 PPP1R13LQ8WUF5 828 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 BRF1Q92994 677 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 RBM28Q9NW13 759 aaKnown RBP16.78■□□□□ 0.28
LITAF-208ENST00000571627 MRVI1Q9Y6F6 885 aa16.78■□□□□ 0.28
LITAF-208ENST00000571627 MEIS2O14770 477 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 SORBS3O60504 671 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 GH1P01241 217 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 RAG1P15918 1043 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 CCND2P30279 289 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 ARHGAP1Q07960 439 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 FUT2Q10981 343 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 VSIG10LQ86VR7 867 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 AFG1LQ8WV93 481 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 FAM217BQ9NTX9 383 aaPredicted RBP16.77■□□□□ 0.28
LITAF-208ENST00000571627 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 DDX41Q9UJV9 622 aaKnown RBP16.77■□□□□ 0.28
LITAF-208ENST00000571627 TBX21Q9UL17 535 aa16.77■□□□□ 0.28
LITAF-208ENST00000571627 FRMPD4Q14CM0 1322 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 A6NJR5 290 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.27
LITAF-208ENST00000571627 UBE2SQ16763 222 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 BRDTQ58F21 947 aaPredicted RBP16.76■□□□□ 0.27
LITAF-208ENST00000571627 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 CUL5Q93034 780 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 LRCH3Q96II8 777 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
LITAF-208ENST00000571627 TRPV6Q9H1D0 765 aa16.76■□□□□ 0.27
LITAF-208ENST00000571627 TLR3O15455 904 aaKnown RBP16.75■□□□□ 0.27
LITAF-208ENST00000571627 B4GALT4O60513 344 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 CD4P01730 458 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 MMP3P08254 477 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
LITAF-208ENST00000571627 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
LITAF-208ENST00000571627 TYW1BQ6NUM6 668 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 PPP1R12CQ9BZL4 782 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 PSTPIP2Q9H939 334 aa16.75■□□□□ 0.27
LITAF-208ENST00000571627 V9GY48 417 aaPredicted RBP16.75■□□□□ 0.27
LITAF-208ENST00000571627 PIK3CDO00329 1044 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 RCAN1P53805 252 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 EPHB4P54760 987 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 C9orf50Q5SZB4 431 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 AGXT2Q9BYV1 514 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
LITAF-208ENST00000571627 RTEL1Q9NZ71 1219 aa16.74■□□□□ 0.27
LITAF-208ENST00000571627 GGPS1O95749 300 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 TIMP1P01033 207 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 UBA1P22314 1058 aaKnown RBP16.73■□□□□ 0.27
LITAF-208ENST00000571627 NAPAP54920 295 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 SP2Q02086 613 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 SHHQ15465 462 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 FAM47CQ5HY64 1035 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
LITAF-208ENST00000571627 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 TM6SF1Q9BZW5 370 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 ALDH8A1Q9H2A2 487 aaPredicted RBP16.73■□□□□ 0.27
LITAF-208ENST00000571627 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
LITAF-208ENST00000571627 TRMT13Q9NUP7 481 aaKnown RBP16.73■□□□□ 0.27
LITAF-208ENST00000571627 UMODL1Q5DID0 1318 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 STXBP3O00186 592 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 KPNA6O60684 536 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 CYP2C18P33260 490 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 FPGSQ05932 587 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
LITAF-208ENST00000571627 EMID1Q96A84 441 aaPredicted RBP16.72■□□□□ 0.27
LITAF-208ENST00000571627 INPP4AQ96PE3 977 aaPredicted RBP16.72■□□□□ 0.27
LITAF-208ENST00000571627 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
LITAF-208ENST00000571627 BCAS3Q9H6U6 928 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 NID2Q14112 1375 aa16.72■□□□□ 0.27
LITAF-208ENST00000571627 ZNF286BP0CG31 522 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 ANAPC15P60006 121 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 LAMC2Q13753 1193 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 DGKDQ16760 1214 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms