RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM160B2Q86V87 743 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 BRPF3Q9ULD4 1205 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 TCF20Q9UGU0 1960 aaKnown RBP15.44■□□□□ 0.06
CCDC40-205ENST00000571028 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 ASB14A6NK59 587 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 DYNC1LI2O43237 492 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-205ENST00000571028 LIFRP42702 1097 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 PSMC6P62333 389 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 TTLL4Q14679 1199 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 KRT40Q6A162 431 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-205ENST00000571028 PIBF1Q8WXW3 757 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
CCDC40-205ENST00000571028 KLRF2D3W0D1 207 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 DDAH1O94760 285 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 NEK4P51957 841 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 OAZ1P54368 228 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 GRM4Q14833 912 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
CCDC40-205ENST00000571028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC40-205ENST00000571028 FGD4Q96M96 766 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-205ENST00000571028 ACAD9Q9H845 621 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 SLC38A10Q9HBR0 1119 aa15.42■□□□□ 0.06
CCDC40-205ENST00000571028 MYO9BQ13459 2157 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 ZBTB43O43298 467 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 CNTN2Q02246 1040 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 TROAPQ12815 778 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 CCDC82Q8N4S0 544 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 PHOSPHO2Q8TCD6 241 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 UIMC1Q96RL1 719 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC40-205ENST00000571028 KATNBL1Q9H079 304 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 MAD2L2Q9UI95 211 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
CCDC40-205ENST00000571028 ASTN1O14525 1302 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 GRIN2DO15399 1336 aa15.41■□□□□ 0.06
CCDC40-205ENST00000571028 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 EPOPA6NHQ4 379 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 GOLGA8AA7E2F4 631 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CALM1P0DP23 149 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CALM2P0DP24 149 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CALM3P0DP25 149 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CYP2C9P11712 490 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 SMPD1P17405 629 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 RFC2P35250 354 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 RBM25P49756 843 aaKnown RBP15.4■□□□□ 0.06
CCDC40-205ENST00000571028 TAP1Q03518 808 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 STK3Q13188 491 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 TOB2Q14106 344 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CSPP1Q1MSJ5 1256 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 SGMS1Q86VZ5 419 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 ADGRF4Q8IZF3 695 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 CMTR1Q8N1G2 835 aaKnown RBP15.4■□□□□ 0.06
CCDC40-205ENST00000571028 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 TRMT13Q9NUP7 481 aaKnown RBP15.4■□□□□ 0.06
CCDC40-205ENST00000571028 GBF1Q92538 1859 aa15.4■□□□□ 0.06
CCDC40-205ENST00000571028 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-205ENST00000571028 PRR33A8MZF0 331 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 PLEKHA8P1O95397 391 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 FDX1P10109 184 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 SSTR3P32745 418 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-205ENST00000571028 KIF5BP33176 963 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 KCNJ6P48051 423 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 AK2P54819 239 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
CCDC40-205ENST00000571028 GRB10Q13322 594 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 FAM47CQ5HY64 1035 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 IQSEC1Q6DN90 963 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 BTNL9Q6UXG8 535 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 EEPD1Q7L9B9 569 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 HOMER1Q86YM7 354 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 FAM133AQ8N9E0 248 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 FANCBQ8NB91 859 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC40-205ENST00000571028 RNF146Q9NTX7 359 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 Q9Y3F1 56 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 REV3LO60673 3130 aa15.39■□□□□ 0.05
CCDC40-205ENST00000571028 PLA2G6O60733 806 aa15.38■□□□□ 0.05
CCDC40-205ENST00000571028 METAP2P50579 478 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC40-205ENST00000571028 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-205ENST00000571028 RTN1Q16799 776 aa15.38■□□□□ 0.05
CCDC40-205ENST00000571028 FBXO16Q8IX29 292 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-205ENST00000571028 TBC1D32Q96NH3 1257 aa15.38■□□□□ 0.05
CCDC40-205ENST00000571028 KIF2CQ99661 725 aa15.38■□□□□ 0.05
CCDC40-205ENST00000571028 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms