RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 FBXO33Q7Z6M2 555 aa16.94■□□□□ 0.3
USP43-202ENST00000570475 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
USP43-202ENST00000570475 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
USP43-202ENST00000570475 ARHGAP20Q9P2F6 1191 aa16.94■□□□□ 0.3
USP43-202ENST00000570475 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
USP43-202ENST00000570475 A0A1W2PQC6 194 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 KLRC4O43908 158 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 OPA1O60313 960 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 GSTO1P78417 241 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 TCP10Q12799 353 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 GPATCH11Q8N954 259 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 NUDT12Q9BQG2 462 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 MNAT1P51948 309 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 GTF2A1P52655 376 aaPredicted RBP16.93■□□□□ 0.3
USP43-202ENST00000570475 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 SNX12Q9UMY4 172 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 E9PMD0 336 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 ZNF76P36508 570 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 GTF2IP78347 998 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
USP43-202ENST00000570475 RBM12Q9NTZ6 932 aaKnown RBP16.93■□□□□ 0.3
USP43-202ENST00000570475 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
USP43-202ENST00000570475 MAN2A1Q16706 1144 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 CFAP221Q4G0U5 840 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 CCSER1Q9C0I3 900 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
USP43-202ENST00000570475 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 MYH8P13535 1937 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 PALMO75781 387 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 AP1M1Q9BXS5 423 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 BACH1O14867 736 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 SLC37A4O43826 429 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 KCNB1Q14721 858 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 USH1GQ495M9 461 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
USP43-202ENST00000570475 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
USP43-202ENST00000570475 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
USP43-202ENST00000570475 ZNF263O14978 683 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 SYF2O95926 243 aaKnown RBP16.91■□□□□ 0.3
USP43-202ENST00000570475 TTBK2Q6IQ55 1244 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 ZNF507Q8TCN5 953 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
USP43-202ENST00000570475 RASA1P20936 1047 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 ARL8AQ96BM9 186 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 UBLCP1Q8WVY7 318 aaPredicted RBP16.91■□□□□ 0.3
USP43-202ENST00000570475 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
USP43-202ENST00000570475 PCDHB13Q9Y5F0 798 aa16.91■□□□□ 0.3
USP43-202ENST00000570475 TLDC2A0PJX2 215 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 STAT3P40763 770 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 USP8P40818 1118 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
USP43-202ENST00000570475 ADAM9Q13443 819 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 STIM2Q9P246 746 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 CHMP2AO43633 222 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 PABPC4Q13310 644 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP43-202ENST00000570475 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 RDH13Q8NBN7 331 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
USP43-202ENST00000570475 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 ACTN1P12814 892 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 NNTQ13423 1086 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
USP43-202ENST00000570475 IFT20Q8IY31 132 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 UBXN6Q9BZV1 441 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
USP43-202ENST00000570475 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.29
USP43-202ENST00000570475 ABCB4P21439 1286 aa16.89■□□□□ 0.29
USP43-202ENST00000570475 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
USP43-202ENST00000570475 PAPD7Q5XG87 772 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms