RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 EPHX3Q9H6B9 360 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 VAT1LQ9HCJ6 419 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 LOC102724159A0A0B4J2E5 919 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 B4E1Z4 1266 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 KDM4AO75164 1064 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 GH1P01241 217 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 RFC2P35250 354 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 KCNJ6P48051 423 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 ZNF200P98182 395 aaPredicted RBP14.13□□□□□ -0.15
CAPN3-220ENST00000569827 PWP2Q15269 919 aaKnown RBP14.13□□□□□ -0.15
CAPN3-220ENST00000569827 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 PNMA1Q8ND90 353 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAPN3-220ENST00000569827 MPHOSPH6Q99547 160 aaKnown RBP14.13□□□□□ -0.15
CAPN3-220ENST00000569827 HDAC6Q9UBN7 1215 aa14.13□□□□□ -0.15
CAPN3-220ENST00000569827 KPNA6O60684 536 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 NBNO60934 754 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 HIC1Q14526 733 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 LRRC8DQ7L1W4 858 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 RMDN3Q96TC7 470 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
CAPN3-220ENST00000569827 FAM86C2PA6NEL3 165 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 CKBP12277 381 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 SELPP16109 830 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 SDSP20132 328 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 POU3F3P20264 500 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-220ENST00000569827 PSEN2P49810 448 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-220ENST00000569827 GPATCH4Q5T3I0 446 aaKnown RBP14.11□□□□□ -0.15
CAPN3-220ENST00000569827 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
CAPN3-220ENST00000569827 STAG2Q8N3U4 1231 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 ENAHQ8N8S7 591 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-220ENST00000569827 PHOSPHO2Q8TCD6 241 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 AFAP1L1Q8TED9 768 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 ESR2Q92731 530 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 TTC14Q96N46 770 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 KAT14Q9H8E8 782 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 GTF2IRD1Q9UHL9 959 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 ABCB11O95342 1321 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 MUC6Q6W4X9 2439 aa14.11□□□□□ -0.15
CAPN3-220ENST00000569827 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 ZNF213O14771 459 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 BAIAP3O94812 1187 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 CFBP00751 764 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 MYCLP12524 364 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-220ENST00000569827 MBTPS1Q14703 1052 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 MFSD10Q14728 455 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 STXBP2Q15833 593 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 KIAA0753Q2KHM9 967 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 AAK1Q2M2I8 961 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 FBXO11Q86XK2 927 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 IL31RAQ8NI17 732 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 CAGE1Q8TC20 777 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 NSUN6Q8TEA1 469 aaKnown RBP14.1□□□□□ -0.15
CAPN3-220ENST00000569827 JMJD4Q9H9V9 463 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 PXMP2Q9NR77 195 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 DDX41Q9UJV9 622 aaKnown RBP14.1□□□□□ -0.15
CAPN3-220ENST00000569827 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 KIAA1671Q9BY89 1806 aa14.1□□□□□ -0.15
CAPN3-220ENST00000569827 B4DLN1 442 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 OPLAHO14841 1288 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 PPP1R11O60927 126 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 CASTP20810 708 aaKnown RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 MRPL12P52815 198 aaKnown RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 CCDC155Q8N6L0 562 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 HLA-CQ95604 372 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 OSBPL7Q9BZF2 842 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 RNF41Q9H4P4 317 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-220ENST00000569827 SUGCTQ9HAC7 445 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 CD320Q9NPF0 282 aa14.09□□□□□ -0.15
CAPN3-220ENST00000569827 NR3C2P08235 984 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 PARP1P09874 1014 aaKnown RBP14.08□□□□□ -0.16
CAPN3-220ENST00000569827 PLA2G5P39877 138 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 HDAC1Q13547 482 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-220ENST00000569827 DGKDQ16760 1214 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
CAPN3-220ENST00000569827 SESTD1Q86VW0 696 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 DGKHQ86XP1 1220 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 RGS22Q8NE09 1264 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 LRFN3Q9BTN0 628 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 IL25Q9H293 177 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 BCAS3Q9H6U6 928 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 ZSWIM5Q9P217 1185 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
CAPN3-220ENST00000569827 WDFY4Q6ZS81 3184 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 RGS20O76081 388 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms