RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 EMC9Q9Y3B6 208 aa7.88□□□□□ -1.15
CHD9-220ENST00000569794 ANKRD34BA5PLL1 514 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 C22orf46C9J442 243 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 DDX3XO00571 662 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHD9-220ENST00000569794 KCNH1O95259 989 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 THBDP07204 575 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 SLC6A11P48066 632 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 FAM126BQ8IXS8 530 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 LCORQ96JN0 433 aaPredicted RBP7.87□□□□□ -1.15
CHD9-220ENST00000569794 SORCS2Q96PQ0 1159 aa7.87□□□□□ -1.15
CHD9-220ENST00000569794 B4GALT3O60512 393 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 C6P13671 934 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 INF2Q27J81 1249 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 KIAA1211LQ6NV74 962 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 ZNF654Q8IZM8 581 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 BTG4Q9NY30 223 aa7.86□□□□□ -1.15
CHD9-220ENST00000569794 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 TACR2P21452 398 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 STAT5AP42229 794 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 CDSNQ15517 529 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 SPRED1Q7Z699 444 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 MILR1Q7Z6M3 343 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 RIOX2Q8IUF8 465 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 SH3RF3Q8TEJ3 882 aaPredicted RBP7.85□□□□□ -1.15
CHD9-220ENST00000569794 SCAND2PQ9GZW5 306 aaPredicted RBP7.85□□□□□ -1.15
CHD9-220ENST00000569794 PPP4R1LQ9P1A2 415 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 TSC22D4Q9Y3Q8 395 aa7.85□□□□□ -1.15
CHD9-220ENST00000569794 LAMTOR5O43504 91 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 ADAM9Q13443 819 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 SURF1Q15526 300 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 PPP2R5EQ16537 467 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 CR1LQ2VPA4 569 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 MROH9Q5TGP6 573 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 POMZP3Q6PJE2 187 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 VHLLQ6RSH7 139 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
CHD9-220ENST00000569794 BVESQ8NE79 360 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 RASGRP4Q8TDF6 673 aa7.84□□□□□ -1.15
CHD9-220ENST00000569794 KISS1RQ969F8 398 aaPredicted RBP7.84□□□□□ -1.15
CHD9-220ENST00000569794 NGRNQ9NPE2 291 aaKnown RBP7.84□□□□□ -1.15
CHD9-220ENST00000569794 ZNF28P17035 718 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 FPR2P25090 351 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 CASP7P55210 303 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 Q8N1X5 172 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 SHDQ96IW2 340 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 CYP26B1Q9NR63 512 aa7.83□□□□□ -1.16
CHD9-220ENST00000569794 CYP4F3Q08477 520 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 ICAM4Q14773 271 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 GTF2IRD2BQ6EKJ0 949 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 PLEKHH3Q7Z736 793 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 GTF2IRD2Q86UP8 949 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 Q8N1Y9 231 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 NPLOC4Q8TAT6 608 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 FRS2Q8WU20 508 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 APBA2Q99767 749 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 X6R8D5 127 aa7.82□□□□□ -1.16
CHD9-220ENST00000569794 GDF5P43026 501 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 NKX3-2P78367 333 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 CRIP3Q6Q6R5 217 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 TRIM59Q8IWR1 403 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 MBD6Q96DN6 1003 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 NKX2-4Q9H2Z4 354 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 CD248Q9HCU0 757 aa7.81□□□□□ -1.16
CHD9-220ENST00000569794 TIMM13Q9Y5L4 95 aaPredicted RBP7.81□□□□□ -1.16
CHD9-220ENST00000569794 NOP56O00567 594 aaKnown RBP7.8□□□□□ -1.16
CHD9-220ENST00000569794 CYP1A1P04798 512 aaPredicted RBP7.8□□□□□ -1.16
CHD9-220ENST00000569794 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
CHD9-220ENST00000569794 HMGA2P52926 109 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
CHD9-220ENST00000569794 IQCEQ6IPM2 695 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 NLRP10Q86W26 655 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 MRGPRX3Q96LB0 322 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 YTHDC1Q96MU7 727 aaKnown RBP7.8□□□□□ -1.16
CHD9-220ENST00000569794 YIPF4Q9BSR8 244 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 KLC2Q9H0B6 622 aa7.8□□□□□ -1.16
CHD9-220ENST00000569794 GPR42O15529 346 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 SLPIP03973 132 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 IL13P35225 146 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 ACVRL1P37023 503 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 PKN3Q6P5Z2 889 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 CEP68Q76N32 757 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 DNERQ8NFT8 737 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
CHD9-220ENST00000569794 NPEPPSL1A6NEC2 478 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 NAT2P11245 290 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 E4F1Q66K89 784 aaPredicted RBP7.78□□□□□ -1.16
CHD9-220ENST00000569794 METTL16Q86W50 562 aaKnown RBP7.78□□□□□ -1.16
CHD9-220ENST00000569794 CIR1Q86X95 450 aaPredicted RBP7.78□□□□□ -1.16
CHD9-220ENST00000569794 CCDC103Q8IW40 242 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
CHD9-220ENST00000569794 CDK5RAP1Q96SZ6 601 aaKnown RBP7.78□□□□□ -1.16
CHD9-220ENST00000569794 LGR4Q9BXB1 951 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 TMEM168Q9H0V1 697 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 L2HGDHQ9H9P8 463 aa7.78□□□□□ -1.16
CHD9-220ENST00000569794 ARNTLO00327 626 aa7.77□□□□□ -1.17
CHD9-220ENST00000569794 CYR61O00622 381 aa7.77□□□□□ -1.17
CHD9-220ENST00000569794 SCAMP3O14828 347 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms