RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 IFNAR1P17181 557 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 CCND2P30279 289 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 CDK7P50613 346 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 MRPS9P82933 396 aaKnown RBP12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 PKN1Q16512 942 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 COPS5Q92905 334 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 PRO3102Q9H379 93 aa12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
SHCBP1-207ENST00000569702 ZEB2O60315 1214 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 STAM2O75886 525 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 CABYRO75952 493 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 TGFB3P10600 412 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 SCG2P13521 617 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 CPT1AP50416 773 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 NAPAP54920 295 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 TLE2Q04725 743 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 PCNX4Q63HM2 1172 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 XRRA1Q6P2D8 792 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 CXCL17Q6UXB2 119 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 ANKRD33Q7Z3H0 272 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 EMID1Q96A84 441 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 RNF26Q9BY78 433 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 ZMYND8Q9ULU4 1186 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
SHCBP1-207ENST00000569702 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 GH1P01241 217 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 SYN1P17600 705 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 ICAM3P32942 547 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 UBE2SQ16763 222 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 GDF15Q99988 308 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
SHCBP1-207ENST00000569702 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 ESYT2A0FGR8 921 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 SPDYE3A6NKU9 549 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 ARVCFO00192 962 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 KPNA6O60684 536 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 ADCY7P51828 1080 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 AK2P54819 239 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 SP2Q02086 613 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 ANKRD1Q15327 319 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 BRDTQ58F21 947 aaPredicted RBP12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 AFG1LQ8WV93 481 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 GLT8D2Q9H1C3 349 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.37
SHCBP1-207ENST00000569702 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 PFKFB2O60825 505 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 MMP3P08254 477 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 CLTBP09497 229 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 BMP8BP34820 402 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 SCRN1Q12765 414 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 STK3Q13188 491 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 LAMC2Q13753 1193 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
SHCBP1-207ENST00000569702 LAMA3Q16787 3333 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 CPLX1O14810 134 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 KIAA0355O15063 1070 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms