RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 AKAP17AQ02040 695 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 PGM5Q15124 567 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 PPP2R5BQ15173 497 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 STXBP2Q15833 593 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 FSCN1Q16658 493 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 IQSEC1Q6DN90 963 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 SLC39A5Q6ZMH5 540 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 TSPYL2Q9H2G4 693 aaPredicted RBP10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 PSTPIP2Q9H939 334 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 STARD7Q9NQZ5 370 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 TMEM260Q9NX78 707 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 B4DLN1 442 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 RBAK-RBAKDNI3L0D1 243 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 ADAMTS3O15072 1205 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 CCND2P30279 289 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 MRPL12P52815 198 aaKnown RBP10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 FOSBP53539 338 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 GJA9P57773 515 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 SP4Q02446 784 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 C8orf34Q49A92 452 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 KLHDC9Q8NEP7 349 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 MORC4Q8TE76 937 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 PDCD2LQ9BRP1 358 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 GNEQ9Y223 722 aaKnown RBP10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 MYH7BA7E2Y1 1941 aa10.38□□□□□ -0.75
GTF3C1-210ENST00000569394 MEIS2O14770 477 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 CPLX1O14810 134 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 CTAGE5O15320 804 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 EDNRBP24530 442 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 NEK4P51957 841 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 AK2P54819 239 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 TLE2Q04725 743 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 FUT2Q10981 343 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 TRAF1Q13077 416 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 TTLL4Q14679 1199 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 FAM47CQ5HY64 1035 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 JAKMIP3Q5VZ66 844 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 PCSK9Q8NBP7 692 aaKnown RBP10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 SCFD2Q8WU76 684 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 GLT1D1Q96MS3 346 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 BCAS3Q9H6U6 928 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 DOCK5Q9H7D0 1870 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 TPCN1Q9ULQ1 816 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 PCDHA6Q9UN73 950 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 KIAA1217Q5T5P2 1943 aa10.37□□□□□ -0.75
GTF3C1-210ENST00000569394 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 SPDYE3A6NKU9 549 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 STXBP3O00186 592 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 ADCY7P51828 1080 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 MRPS9P82933 396 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 SSRP1Q08945 709 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 CCSAPQ6IQ19 270 aaPredicted RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 AFG1LQ8WV93 481 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 AIFM3Q96NN9 605 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 TM6SF1Q9BZW5 370 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 UPF3AQ9H1J1 476 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 VPS54Q9P1Q0 977 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
GTF3C1-210ENST00000569394 RBM47A0AV96 593 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 MOXD2PA6NHM9 499 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 EPB41L2O43491 1005 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 ZEB2O60315 1214 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 RGS20O76081 388 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 LARGE1O95461 756 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 GH1P01241 217 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 SCG2P13521 617 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 CAPN2P17655 700 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 FXR1P51114 621 aaKnown RBP eCLIP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 SP2Q02086 613 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 SCRN1Q12765 414 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 NTRK3Q16288 839 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 PKN1Q16512 942 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 PFKFB3Q16875 520 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 DHX37Q8IY37 1157 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 TSEN34Q9BSV6 310 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 ALG1Q9BT22 464 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 AGXT2Q9BYV1 514 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 MLXIPQ9HAP2 919 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 TMEM39AQ9NV64 488 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 DDX41Q9UJV9 622 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 TELO2Q9Y4R8 837 aa10.35□□□□□ -0.75
GTF3C1-210ENST00000569394 PRPF3O43395 683 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms