RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 NEDD4P46934 1319 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 A6NJR5 290 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ERC2O15083 957 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ZEB2O60315 1214 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 FGAP02671 866 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MYL3P08590 195 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 CALML3P27482 149 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TAP1Q03518 808 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 BMP2KLQ5H9B9 411 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 WDR19Q8NEZ3 1342 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
CHRFAM7A-206ENST00000569278 C5orf42Q9H799 3197 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 LCHNA4D1U4 455 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PFKMP08237 780 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 IQCF3P0C7M6 154 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 CPT1AP50416 773 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TMCO2Q7Z6W1 182 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 KAT2BQ92831 832 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
CHRFAM7A-206ENST00000569278 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 HAND2P61296 217 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ARHGAP1Q07960 439 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 RNF207Q6ZRF8 634 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 WNT8BQ93098 351 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 SIP14410 1827 aa13.1□□□□□ -0.31
CHRFAM7A-206ENST00000569278 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 PDE1AP54750 535 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 DEFB103AP81534 67 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 SCFD2Q8WU76 684 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 SLC9A7Q96T83 725 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MYH6P13533 1939 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 OPLAHO14841 1288 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 NBNO60934 754 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 MMP3P08254 477 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 RFC2P35250 354 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 RBL2Q08999 1139 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 GRB10Q13322 594 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 HIC1Q14526 733 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 FAM47CQ5HY64 1035 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SESTD1Q86VW0 696 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-206ENST00000569278 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TLL1O43897 1013 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PLA2G5P39877 138 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PDE4DQ08499 809 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 USH1GQ495M9 461 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SYTL5Q8TDW5 730 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ARNTL2Q8WYA1 636 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 UBA5Q9GZZ9 404 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms