RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 FOSL1P15407 271 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 KIR3DS1Q14943 382 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
UBR1-208ENST00000569066 AOC3Q16853 763 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 IQCEQ6IPM2 695 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 FCRL2Q96LA5 508 aaPredicted RBP7.82□□□□□ -1.16
UBR1-208ENST00000569066 ZNF281Q9Y2X9 895 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 RWDD3Q9Y3V2 267 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 TIMM13Q9Y5L4 95 aaPredicted RBP7.82□□□□□ -1.16
UBR1-208ENST00000569066 TCRBV5S4A2TA0A5A2 114 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 SHTN1A0MZ66 631 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 WNT9AO14904 365 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 USP2O75604 605 aaPredicted RBP7.81□□□□□ -1.16
UBR1-208ENST00000569066 KRT37O76014 449 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 COL6A2P12110 1019 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 KRT15P19012 456 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 RAB27AP51159 221 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 ST5P78524 1137 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 BNIP3Q12983 259 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 CEP68Q76N32 757 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 TMPRSS7Q7RTY8 843 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 OSTM1Q86WC4 334 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 FBXW5Q969U6 566 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 HHIPL1Q96JK4 782 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 MS4A5Q9H3V2 200 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 NAT1P18440 290 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 JAM2P57087 298 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 NKAPLQ5M9Q1 402 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 SMURF1Q9HCE7 757 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 GABBR1Q9UBS5 961 aa7.81□□□□□ -1.16
UBR1-208ENST00000569066 TRBV23OR9-2A0A075B6M9 112 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 FAM47E-STBD1D6RA91 191 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 MYO1BO43795 1136 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 EFEMP2O95967 443 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 NEK2P51955 445 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 LSAMPQ13449 338 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 RSPO4Q2I0M5 234 aaPredicted RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 ABCB5Q2M3G0 1257 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 RALGPS1Q5JS13 557 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 CYP2R1Q6VVX0 501 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 HDGFL2Q7Z4V5 671 aaPredicted RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 CMIPQ8IY22 773 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 HRASLS5Q96KN8 279 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 JMJD8Q96S16 334 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 B4GALT6Q9UBX8 382 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 APOBEC2Q9Y235 224 aaKnown RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 WTIPA6NIX2 430 aaPredicted RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 FAM47CQ5HY64 1035 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 WDR75Q8IWA0 830 aaKnown RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 TMEM169Q96HH4 297 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
UBR1-208ENST00000569066 ZKSCAN5Q9Y2L8 839 aa7.8□□□□□ -1.16
UBR1-208ENST00000569066 TNKSO95271 1327 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 NKRFO15226 690 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBR1-208ENST00000569066 ZEB2O60315 1214 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 SCGB1D2O95969 90 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 PROCP04070 461 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 AMY2AP04746 511 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 APPP05067 770 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 AMY2BP19961 511 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 TACR1P25103 407 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 IARSP41252 1262 aaKnown RBP7.79□□□□□ -1.16
UBR1-208ENST00000569066 NFE2Q16621 373 aaPredicted RBP7.79□□□□□ -1.16
UBR1-208ENST00000569066 IQSEC1Q6DN90 963 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
UBR1-208ENST00000569066 LCHNA4D1U4 455 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
UBR1-208ENST00000569066 C2orf69Q8N8R5 385 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 CLRN3Q8NCR9 226 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 MAP6Q96JE9 813 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 ADAMTS10Q9H324 1103 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 ZIM2Q9NZV7 527 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 AKAP10O43572 662 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 CPZQ66K79 652 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 C16orf59Q7L2K0 433 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 PTRH1Q86Y79 214 aaKnown RBP7.78□□□□□ -1.16
UBR1-208ENST00000569066 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 SLC52A1Q9NWF4 448 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
UBR1-208ENST00000569066 FADS2P1A8MWK0 482 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 GSC2O15499 205 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 GDF11O95390 407 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 FUCA1P04066 466 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 EPHB1P54762 984 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 IKZF1Q13422 519 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 CPSF6Q16630 551 aaKnown RBP eCLIP7.77□□□□□ -1.17
UBR1-208ENST00000569066 SYDE2Q5VT97 1194 aa7.77□□□□□ -1.17
UBR1-208ENST00000569066 RBM12BQ8IXT5 1001 aaKnown RBP7.77□□□□□ -1.17
UBR1-208ENST00000569066 CBARPQ8N350 705 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms